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Searched defs:pairarray (Results 1 – 15 of 15) sorted by relevance

/dports/sysutils/fwup/fwup-1.9.0/src/
H A Duboot_env.c209 struct uboot_name_value **pairarray = in uboot_env_sort() local
/dports/biology/gmap/gmap-2020-09-12/src/
H A Dsimplepair.c295 struct T *pairarray, int npairs, int querylength, in Simplepair_genomicpos_low()
1729 Simplepair_overlap_print_sam (Filestring_T fp, char *abbrev, struct T *pairarray, int npairs, in Simplepair_overlap_print_sam()
H A Dpair.c248 Pair_set_genomepos (struct T *pairarray, int npairs, in Pair_set_genomepos()
3918 Pair_print_bedpe (Filestring_T fp, struct T *pairarray, int npairs, in Pair_print_bedpe()
6328 Pair_print_sam (Filestring_T fp, char *abbrev, struct T *pairarray, int npairs, in Pair_print_sam()
7563 Pair_array_nmatches_posttrim (struct T *pairarray, int npairs, int pos5, int pos3) { in Pair_array_nmatches_posttrim()
9773 struct T *pairarray, int npairs) { in Pairarray_chrpos_bounds()
9788 Pairarray_genomicbound_from_start (struct T *pairarray, int npairs, int overlap) { in Pairarray_genomicbound_from_start()
9806 Pairarray_genomicbound_from_end (struct T *pairarray, int npairs, int overlap) { in Pairarray_genomicbound_from_end()
9825 Pairarray_genomic_sequence (int *seqlength, struct T *pairarray, int npairs) { in Pairarray_genomic_sequence()
H A Dstage3.c555 …struct Pair_T *pairarray; /* The array version of pairs_fwd or pairs_rev, with the gaps substitute… member
5240 struct Pair_T *pairarray; in make_pairarray() local
5303 struct Pair_T *pairarray, *pairarray_save; in make_pairarray_merge() local
5899 Stage3_new (struct Pair_T *pairarray, List_T pairs, int npairs, int goodness, int cdna_direction, i… in Stage3_new()
6049 struct Pair_T *pairarray; in Stage3_new_from_pairs() local
12923 Stage3_short_alignment_p (struct Pair_T *pairarray, int npairs, int querylength) { in Stage3_short_alignment_p()
13076 Stage3_bad_stretch_p (struct Pair_T *pairarray, int npairs, int pos5, int pos3) { in Stage3_bad_stretch_p()
13140 Stage3_good_part (struct Pair_T *pairarray, int npairs, int pos5, int pos3) { in Stage3_good_part()
18853 struct Pair_T *pairarray; in Stage3_split() local
H A Dgmap.c1272 struct Pair_T *pairarray; in update_stage3list() local
1450 struct Pair_T *pairarray; in stage3_from_usersegment() local
1781 struct Pair_T *pairarray; in stage3_from_gregions() local
H A Dsamprint.c1437 struct Simplepair_T *pairarray; in SAM_print_paired() local
H A Dstage3hr.c10488 struct Simplepair_T *pairarray, *newpair; in Stage3pair_merge() local
/dports/print/texlive-base/texlive-20150521-source/utils/asymptote/
H A Drunmath.cc70 typedef array pairarray; typedef
H A Drunpicture.cc90 typedef array pairarray; typedef
H A Druntime.cc139 typedef array pairarray; typedef
H A Drunarray.cc86 typedef array pairarray; typedef
/dports/math/asymptote/asymptote-2.67/
H A Drunmath.cc80 typedef array pairarray; typedef
H A Drunpicture.cc92 typedef array pairarray; typedef
H A Druntime.cc137 typedef array pairarray; typedef
H A Drunarray.cc92 typedef array pairarray; typedef