| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/graphs/ |
| H A D | JunctionTreeKBestHaplotypeFinderUnitTest.java | 79 final int readlength = 6; in testDegenerateLoopingCase() local
316 int readlength = 20; in testPerfectlyPhasedHaplotypeRecoveryRef() local
351 int readlength = 20; in testInsufficientJunctionTreeDataCausingCombinatorialExpansion() local
387 int readlength = 20; in testPerfectlyPhasedHaplotypeRecoveryTwoAlts() local
423 int readlength = 15; in testNonUniqueRefStopPosition() local
456 int readlength = 15; in testNonUniqueRefStopPositionNoStopJTToResolveIt() local
489 int readlength = 15; in testReferenceEndWithErrorSpanningPastEndBase() local
523 int readlength = 15; in testFullReferencePathRecoveryDespiteReadsNotReachingLastBase() local
557 int readlength = 15; in testOfLoopingReferenceReadsTooShortToRecoverIt() local
1206 int readlength = 20; in testCreateMapOfPivotalEdgesInTopoglogicalOrderBasicExample() local
[all …]
|
| /dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/core/fxcodec/jpx/ |
| H A D | jpx_decode_utils.cpp | 28 OPJ_SIZE_T readlength = nb_bytes < bufferLength ? nb_bytes : bufferLength; in opj_read_from_memory() local
|
| /dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/core/fxcodec/jpx/ |
| H A D | jpx_decode_utils.cpp | 28 OPJ_SIZE_T readlength = nb_bytes < bufferLength ? nb_bytes : bufferLength; in opj_read_from_memory() local
|
| /dports/net-p2p/btcheck/btcheck-2.1/src/ |
| H A D | check.c | 35 integer_t readlength; in check() local
|
| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/pileup/ |
| H A D | ReadPileupUnitTest.java | 311 final int readlength = 10; in testSimplePileup() local
360 final int readlength = 10; in testSimplePileupWithIndelsOffset() local
418 final int readlength = 10; in testSimplePileupWithOffset() local
633 final int readlength = 10; in testOverlappingFragmentFilter() local
|
| /dports/comms/owfs/owfs-3.2p4/module/owlib/src/include/ |
| H A D | ow_transaction.h | 134 #define TRXN_WR_CRC16(pointer,writelength,readlength) \ argument
139 #define TRXN_WR_CRC16_SEEDED(pointer,seed, writelength,readlength) \ argument
|
| /dports/biology/gmap/gmap-2020-09-12/src/ |
| H A D | samread.c | 38 int readlength; in cigar_string_readlength() local
1208 Samread_parse_read_fromfile (FILE *fp, unsigned int *flag, int *readlength, char **read, int linele… in Samread_parse_read_fromfile()
|
| /dports/biology/bbmap/bbmap/current/jgi/ |
| H A D | SynthMDA.java | 394 private int readlength=150; field in SynthMDA
|
| /dports/science/nwchem-data/nwchem-7.0.2-release/src/lucia/ |
| H A D | cio.c | 153 INT readlength; local
|
| /dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/lucia/ |
| H A D | cio.c | 153 INT readlength; local
|
| /dports/security/shibboleth-sp/shibboleth-sp-3.3.0/shibsp/remoting/impl/ |
| H A D | SocketListener.cpp | 528 int readlength = m_listener->recv(m_sock,(char*)&len,sizeof(len)); in job() local
|
| /dports/devel/py-defusedxml/defusedxml-0.6.0/ |
| H A D | tests.py | 478 def decode_response(self, response, limit=None, readlength=1024): argument
|
| /dports/mail/claws-mail-perl/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-vcalendar/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-pgp/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-newmail/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-pdf_viewer/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-mailmbox/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-spamassassin/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-attachwarner/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-bsfilter/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-litehtml_viewer/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-clamd/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-fetchinfo/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|
| /dports/mail/claws-mail-managesieve/claws-mail-3.18.0/src/ |
| H A D | procmime.c | 664 gint restlength, readlength; in procmime_get_part_to_stream() local
2675 gint length, readlength; in procmime_get_part_as_string() local
|