Searched defs:sam_flags (Results 1 – 7 of 7) sorted by relevance
| /dports/biology/sra-tools/sra-tools-2.11.0/tools/sra-pileup/ |
| H A D | sam-unaligned.c | 688 … uint32_t sam_flags = calculate_unaligned_sam_flags_db( nreads, read_idx, mate_idx, in dump_seq_row_sam_filtered() local
831 uint32_t sam_flags; in dump_seq_prim_row_sam() local
1007 uint32_t sam_flags = calculate_unaligned_sam_flags_db( nreads, read_idx, mate_idx, in dump_seq_row_sam() local
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| H A D | sam-aligned.c | 1014 uint32_t seq_name_len, sam_flags, spot_group_len = 0; in print_evidence_alignment_cg_sam() local
1139 uint32_t seq_name_len, sam_flags, spot_group_len = 0; in print_evidence_alignment_cg_ev_dnb() local
1469 …uint32_t sam_flags = 0, NM_adjustments = 0, seq_spot_id_len, mate_ref_pos_len = 0, mate_ref_name_l… in print_alignment_sam_ps() local
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| H A D | sam-dump.c | 204 uint32_t sam_flags; member
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| /dports/biology/sra-tools/sra-tools-2.11.0/test/samline/ |
| H A D | alig-gen.c | 289 static uint32_t sam_flags( const alignment * alig, const alignment * other, int first, int last ) in sam_flags() function
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/magicblast/ |
| H A D | magicblast_util.cpp | 930 int sam_flags = 0; in PrintSAM() local
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| /dports/sysutils/vector/vector-0.10.0/cargo-crates/krb5-src-0.2.4+1.18.2/krb5/src/include/ |
| H A D | k5-int.h | 468 krb5_flags sam_flags; /* KRB5_SAM_* values */ member
482 krb5_flags sam_flags; /* KRB5_SAM_* values */ member
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| /dports/security/krb5/krb5-1.19.2/src/include/ |
| H A D | k5-int.h | 472 krb5_flags sam_flags; /* KRB5_SAM_* values */ member
486 krb5_flags sam_flags; /* KRB5_SAM_* values */ member
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