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Searched defs:samechr (Results 1 – 2 of 2) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dconcordance.c965 List_T *conc_transloc, List_T *samechr, in do_distant_plus_plus()
1115 List_T *conc_transloc, List_T *samechr, in do_distant_minus_minus()
1264 do_distant_plus_minus (List_T *samechr, in do_distant_plus_minus()
1384 do_distant_minus_plus (List_T *samechr, in do_distant_minus_plus()
1506 List_T *samechr, List_T *conc_transloc, List_T hitpairs, in Concordance_pair_up_distant()
H A Dstage1hr.c1574 List_T hitpairs, List_T samechr, List_T conc_transloc) { in choose_among_paired()
1628 paired_read_segment_search (bool *abort_pairing_p, List_T *samechr, List_T *conc_transloc, in paired_read_segment_search()
2222 paired_read (bool *abort_pairing_p, List_T *hits5, List_T *hits3, List_T *samechr, List_T *conc_tra… in paired_read()
2395 List_T hitpairs, List_T samechr, List_T conc_transloc, List_T hits5, List_T hits3, in consolidate_paired_results()
2790 List_T samechr, geneplus_samechr, geneminus_samechr; in Stage1_paired_read() local