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/dports/biology/seqan1/seqan-1.3.1/seqan/blast/
H A Dblast_stream_hit.h45 template<typename TBlastHsp, typename TFile>
46 class BlastHit<TBlastHsp, StreamReport<TFile> >
49 typedef typename Position<TFile>::Type TPosition_;
56 BlastReport<TBlastHsp,StreamReport<TFile> >* data_host;
73 template<typename TFile, typename TChar, typename TBlastSpec>
74 inline typename Position<TFile>::Type
75 _parseBlastHit(TFile & file, in _parseBlastHit()
77 BlastHit<TBlastSpec,StreamReport<TFile> > & hit) in _parseBlastHit()
79 typedef typename Position<TFile>::Type TPosition; in _parseBlastHit()
80 typedef BlastHit<TBlastSpec,StreamReport<TFile> > TBlastHit; in _parseBlastHit()
H A Dblast_parsing.h50 template<typename TFile, typename TChar>
52 _parseReadAlignmentString(TFile & file, TChar& c) in _parseReadAlignmentString()
71 template<typename TFile, typename TChar>
72 typename Position<TFile>::Type
73 _parseReadQueryAndDBName(TFile & file, in _parseReadQueryAndDBName()
79 typedef typename Position<TFile>::Type TPosition; in _parseReadQueryAndDBName()
80 typedef typename Value<TFile>::Type TValue; in _parseReadQueryAndDBName()
/dports/net/freeswitch/freeswitch-1.10.3.-release/libs/xmlrpc-c/lib/abyss/src/
H A Dfile.h77 typedef struct TFile { struct
79 } TFile; typedef
82 FileOpen(TFile ** const filePP,
87 FileOpenCreate(TFile ** const filePP,
92 FileClose(TFile * const fileP);
95 FileWrite(const TFile * const fileP,
100 FileRead(const TFile * const fileP,
105 FileSeek(const TFile * const fileP,
110 FileSize(const TFile * const fileP);
/dports/multimedia/opentoonz/opentoonz-1.5.0/toonz/sources/image/zcc/
H A Dtfile.h42 class TFile {
47 TFile() {} in TFile() function
48 TFile(const TFilePath &fname, uint32 flags = TFileConsts::kRead |
54 ~TFile();
84 TFile(const TFile &);
85 const TFile &operator=(const TFile &f);
/dports/editors/lazarus/lazarus/tools/snapshots/
H A Dmonitorcfg.pas14 TFile = class;
55 function GetFile(index: integer): TFile; in GetFile()
61 procedure AddFile(AFile: TFile);
64 property Files[index: integer] : TFile read GetFile;
71 TFile = class class
96 function TServer.GetFile(index: integer): TFile; in TServer.GetFile()
98 Result := TFile(FFiles[index]);
108 NewFile: TFile;
110 NewFile := TFile.Create;
128 procedure TServer.AddFile(AFile: TFile);
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/dports/editors/lazarus-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/tools/snapshots/
H A Dmonitorcfg.pas14 TFile = class;
55 function GetFile(index: integer): TFile; in GetFile()
61 procedure AddFile(AFile: TFile);
64 property Files[index: integer] : TFile read GetFile;
71 TFile = class class
96 function TServer.GetFile(index: integer): TFile; in TServer.GetFile()
98 Result := TFile(FFiles[index]);
108 NewFile: TFile;
110 NewFile := TFile.Create;
128 procedure TServer.AddFile(AFile: TFile);
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/dports/editors/lazarus-qt5/lazarus/tools/snapshots/
H A Dmonitorcfg.pas14 TFile = class;
55 function GetFile(index: integer): TFile; in GetFile()
61 procedure AddFile(AFile: TFile);
64 property Files[index: integer] : TFile read GetFile;
71 TFile = class class
96 function TServer.GetFile(index: integer): TFile; in TServer.GetFile()
98 Result := TFile(FFiles[index]);
108 NewFile: TFile;
110 NewFile := TFile.Create;
128 procedure TServer.AddFile(AFile: TFile);
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/dports/editors/lazarus-qt5-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/tools/snapshots/
H A Dmonitorcfg.pas14 TFile = class;
55 function GetFile(index: integer): TFile; in GetFile()
61 procedure AddFile(AFile: TFile);
64 property Files[index: integer] : TFile read GetFile;
71 TFile = class class
96 function TServer.GetFile(index: integer): TFile; in TServer.GetFile()
98 Result := TFile(FFiles[index]);
108 NewFile: TFile;
110 NewFile := TFile.Create;
128 procedure TServer.AddFile(AFile: TFile);
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/dports/biology/seqan1/seqan-1.3.1/seqan/graph_types/
H A Dgraph_drawing.h329 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
340 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
351 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
363 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
422 _writeEdgeType(TFile & file, in _writeEdgeType()
434 _writeEdgeType(TFile & file, in _writeEdgeType()
486 write(TFile & file, in write()
550 write(TFile & file, in write()
571 write(TFile & file, in write()
895 void read(TFile & file, in read()
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/dports/biology/seqan1/seqan-1.3.1/seqan/file/
H A Dfile_format_cgviz.h60 template <typename TFile>
61 void goNext(TFile & file, CGViz) { in goNext()
75 template <typename TFile, typename TStringContainer, typename TSource, typename TSpec>
76 void _writeImpl(TFile& target, Align<TSource, TSpec>& align, TStringContainer& ids, CGViz) { in _writeImpl()
203 template <typename TFile, typename TSource, typename TSpec>
204 void write(TFile & file, Align<TSource, TSpec>& align, CGViz) { in write()
211 template <typename TFile, typename TStringContainer, typename TSource, typename TSpec>
212 void write(TFile & file, Align<TSource, TSpec> & align, TStringContainer& ids, CGViz) { in write()
219 template <typename TFile, typename TStringContainer, typename TSource, typename TSpec>
220 void write(TFile & file, Align<TSource, TSpec>* align, TStringContainer & ids, CGViz) { in write()
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/dports/graphics/tesseract/tesseract-5.0.0/unittest/
H A Dtfile_test.cc55 bool Serialize(TFile *fp) { in Serialize()
70 bool DeSerialize(TFile *fp) { in DeSerialize()
85 bool SerializeBigEndian(TFile *fp) { in SerializeBigEndian()
113 bool DeSerializeBigEndian(TFile *fp) { in DeSerializeBigEndian()
155 TFile fpw; in TEST_F()
158 TFile fpr; in TEST_F()
176 TFile fpw; in TEST_F()
182 TFile fpr; in TEST_F()
201 TFile fpw; in TEST_F()
204 TFile fpr; in TEST_F()
/dports/biology/seqan1/seqan-1.3.1/demos/
H A Dfile_speed.cpp17 template <typename TFile>
20 TFile myFile; in testThroughput()
21 typename AsyncRequest<TFile>::Type req1, req2; in testThroughput()
48 template <typename TFile>
51 String<char, External<ExternalConfig<TFile> > > myString; in testExtString()
70 template <typename TFile>
73 String<char, MMap<ExternalConfig<TFile> > > myString; in testMMapString()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/seq_io/
H A Dsequence_file.h211 template <typename TIdString, typename TSeqString, typename TFile>
215 TFile & /* file */,
219 template <typename TIdString, typename TSeqString, typename TFile, typename TTagList>
223 TFile & file,
243 TFile & /* file */,
252 TFile & file,
454 template <typename TFile, typename TIdString, typename TSeqString>
456 writeRecord(TFile & /* file */,
462 template <typename TFile, typename TIdString, typename TSeqString, typename TTagList>
463 inline void writeRecord(TFile & file,
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/seq_io/
H A Dsequence_file.h211 template <typename TIdString, typename TSeqString, typename TFile>
215 TFile & /* file */,
219 template <typename TIdString, typename TSeqString, typename TFile, typename TTagList>
223 TFile & file,
243 TFile & /* file */,
252 TFile & file,
454 template <typename TFile, typename TIdString, typename TSeqString>
456 writeRecord(TFile & /* file */,
462 template <typename TFile, typename TIdString, typename TSeqString, typename TTagList>
463 inline void writeRecord(TFile & file,
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/dports/net/xmlrpc-c/xmlrpc-c-1.51.07/lib/abyss/src/
H A Dfile.c99 createFileImage(TFile ** const filePP, in createFileImage()
105 TFile * fileP; in createFileImage()
133 FileOpen(TFile ** const filePP, in FileOpen()
147 FileOpenCreate(TFile ** const filePP, in FileOpenCreate()
161 FileWrite(const TFile * const fileP, in FileWrite()
175 FileRead(const TFile * const fileP, in FileRead()
185 FileSeek(const TFile * const fileP, in FileSeek()
201 FileSize(const TFile * const fileP) { in FileSize()
216 FileClose(TFile * const fileP) { in FileClose()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/unassigned_or_unused/
H A Dfile_speed.cpp16 template <typename TFile>
19 TFile myFile; in testThroughput()
20 typename AsyncRequest<TFile>::Type req1, req2; in testThroughput()
48 template <typename TFile>
51 String<char, External<ExternalConfig<TFile> > > myString; in testExtString()
71 template <typename TFile>
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/graph_types/
H A Dgraph_drawing.h314 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
325 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
336 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
348 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
359 _writeGraphType(TFile & file, in _writeGraphType()
407 _writeEdgeType(TFile & file, in _writeEdgeType()
419 _writeEdgeType(TFile & file, in _writeEdgeType()
431 _writeEdgeType(TFile & file, in _writeEdgeType()
443 _writeEdgeType(TFile & file, in _writeEdgeType()
533 TFile & file, in writeRecords()
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/graph_types/
H A Dgraph_drawing.h314 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
325 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
336 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
348 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
359 _writeGraphType(TFile & file, in _writeGraphType()
407 _writeEdgeType(TFile & file, in _writeEdgeType()
419 _writeEdgeType(TFile & file, in _writeEdgeType()
431 _writeEdgeType(TFile & file, in _writeEdgeType()
443 _writeEdgeType(TFile & file, in _writeEdgeType()
533 TFile & file, in writeRecords()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_types/
H A Dgraph_drawing.h323 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
335 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
347 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
360 _writeGraphFooter(TFile &, in _writeGraphFooter() argument
372 _writeGraphType(TFile & file, in _writeGraphType()
420 _writeEdgeType(TFile & file, in _writeEdgeType()
432 _writeEdgeType(TFile & file, in _writeEdgeType()
444 _writeEdgeType(TFile & file, in _writeEdgeType()
456 _writeEdgeType(TFile & file, in _writeEdgeType()
546 TFile & file, in writeRecords()
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/dports/biology/seqan1/seqan-1.3.1/seqan/score/
H A Dscore_matrix.h275 template <typename TFile, typename TMeta>
277 readMeta(TFile & fl, TMeta & meta, ScoreMatrixFile) { in readMeta()
294 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec>
300 typedef typename Value<TFile>::Type TFileValue; in read()
381 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec>
383 read(TFile & fl, Score<TValue, ScoreMatrix<TSequenceValue, TSpec> > & sc) { in read()
495 template <typename TSequenceValue, typename TFile, typename TValue, typename TMeta>
497 _writeScoringMatrix(TFile & fl, TValue * tab, TMeta & meta) { in _writeScoringMatrix()
499 typedef typename Value<TFile>::Type TFileValue; in _writeScoringMatrix()
506 typedef typename Value<TFile>::Type TFileValue; in _writeScoringMatrix()
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H A Dscore_generated_forwards.h216 …plate <typename TSequenceValue, typename TFile, typename TValue, typename TMeta> void _writeScorin…
227 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec> void read(TFile…
228 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec> inline void rea…
233 template <typename TFile, typename TMeta> void readMeta(TFile & fl, TMeta & meta, ScoreMatrixFile);…
344 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec, typename TMeta>…
345 template <typename TFile, typename TValue, typename TSequenceValue, typename TSpec> inline void wri…
/dports/biology/seqan1/seqan-1.3.1/seqan/sequence/
H A Dsequence_forwards.h65 template <typename TFile, typename TData>
66 void read(TFile & file, TData & data); // "projects/library/seqan/file/file_format_raw.h"(…
70 template <typename TFile, typename TData>
71 void write(TFile & file, TData & data); // "projects/library/seqan/file/file_format_raw.h"(…
73 template <typename TFile, typename TData>
74 void write(TFile & file, TData const & data); // "projects/library/seqan/file/file_format_raw.h"(…
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/file/
H A Dstring_mmap.h86 typedef TFile_ TFile; typedef
140 typedef typename TConfig::TFile TFile; typedef
160 String(TFile &_file): in String()
365 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
391 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
422 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
446 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
591 typedef typename String<TValue, MMap<TConfig> >::TFile TFile;
592 return open(me, fileName, DefaultOpenMode<TFile>::VALUE);
597 open(String<TValue, MMap<TConfig> > &me, typename TConfig::TFile file)
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/file/
H A Dstring_mmap.h86 typedef TFile_ TFile; typedef
140 typedef typename TConfig::TFile TFile; typedef
160 String(TFile &_file): in String()
365 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
391 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
422 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
446 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
591 typedef typename String<TValue, MMap<TConfig> >::TFile TFile;
592 return open(me, fileName, DefaultOpenMode<TFile>::VALUE);
597 open(String<TValue, MMap<TConfig> > &me, typename TConfig::TFile file)
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/file/
H A Dstring_mmap.h86 typedef TFile_ TFile; typedef
140 typedef typename TConfig::TFile TFile; typedef
160 String(TFile &_file): in String()
371 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
397 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
428 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
452 typedef typename Size<typename TConfig::TFile>::Type TFileSize;
597 typedef typename String<TValue, MMap<TConfig> >::TFile TFile;
598 return open(me, fileName, DefaultOpenMode<TFile>::VALUE);
603 open(String<TValue, MMap<TConfig> > &me, typename TConfig::TFile file)
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