1 /** 2 * UGENE - Integrated Bioinformatics Tools. 3 * Copyright (C) 2008-2021 UniPro <ugene@unipro.ru> 4 * http://ugene.net 5 * 6 * This program is free software; you can redistribute it and/or 7 * modify it under the terms of the GNU General Public License 8 * as published by the Free Software Foundation; either version 2 9 * of the License, or (at your option) any later version. 10 * 11 * This program is distributed in the hope that it will be useful, 12 * but WITHOUT ANY WARRANTY; without even the implied warranty of 13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 14 * GNU General Public License for more details. 15 * 16 * You should have received a copy of the GNU General Public License 17 * along with this program; if not, write to the Free Software 18 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, 19 * MA 02110-1301, USA. 20 */ 21 22 #ifndef _U2_BAM_FORMAT_H_ 23 #define _U2_BAM_FORMAT_H_ 24 25 #include <QStringList> 26 27 #include <U2Core/DbiDocumentFormat.h> 28 #include <U2Core/GUrl.h> 29 #include <U2Core/U2FormatCheckResult.h> 30 31 namespace U2 { 32 33 class BAMFormat : public DbiDocumentFormat { 34 Q_OBJECT 35 public: 36 BAMFormat(); 37 38 void storeDocument(Document *d, IOAdapter *io, U2OpStatus &os); 39 }; 40 41 namespace BAM { 42 43 class BAMFormatUtils : public QObject { 44 Q_OBJECT 45 public: 46 BAMFormatUtils(QObject *parent = nullptr); 47 48 FormatCheckResult checkRawData(const QByteArray &rawData, const GUrl &url = GUrl()) const; 49 getSupportedDocumentFileExtensions()50 QStringList getSupportedDocumentFileExtensions() const { 51 return fileExtensions; 52 } 53 54 private: 55 QStringList fileExtensions; 56 }; 57 58 } // namespace BAM 59 } // namespace U2 60 61 #endif // _U2_BAM_FORMAT_H_ 62