1 //
2 //  kimura.hpp
3 //  Mothur
4 //
5 //  Created by Sarah Westcott on 7/2/21.
6 //  Copyright © 2021 Schloss Lab. All rights reserved.
7 //
8 
9 #ifndef kimura_hpp
10 #define kimura_hpp
11 
12 #include "calculator.h"
13 
14 
15 /**************************************************************************************************/
16 //Kimura(Kimura formula)
17 
18 class Kimura : public DistCalc {
19 
20 public:
21 
Kimura(double c)22     Kimura(double c) : DistCalc(c) { name = "Kimura (Kimura formula)"; }
23 
24     double calcDist(Protein A, Protein B); //calc distance between 2 seqeunces
getCitation()25     string getCitation() { return "https://evolution.gs.washington.edu/phylip/doc/protdist.html, https://evolution.genetics.washington.edu/phylip/credits.html"; }
26 
27 private:
28 
29 
30 };
31 
32 /**************************************************************************************************/
33 
34 #endif /* kimura_hpp */
35