1 // 2 // kimura.hpp 3 // Mothur 4 // 5 // Created by Sarah Westcott on 7/2/21. 6 // Copyright © 2021 Schloss Lab. All rights reserved. 7 // 8 9 #ifndef kimura_hpp 10 #define kimura_hpp 11 12 #include "calculator.h" 13 14 15 /**************************************************************************************************/ 16 //Kimura(Kimura formula) 17 18 class Kimura : public DistCalc { 19 20 public: 21 Kimura(double c)22 Kimura(double c) : DistCalc(c) { name = "Kimura (Kimura formula)"; } 23 24 double calcDist(Protein A, Protein B); //calc distance between 2 seqeunces getCitation()25 string getCitation() { return "https://evolution.gs.washington.edu/phylip/doc/protdist.html, https://evolution.genetics.washington.edu/phylip/credits.html"; } 26 27 private: 28 29 30 }; 31 32 /**************************************************************************************************/ 33 34 #endif /* kimura_hpp */ 35