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Searched refs:o_vcf (Results 1 – 3 of 3) sorted by relevance

/dports/biology/stacks/stacks-2.4/scripts/
H A Dstacks-integrate-alignments67 o_vcf="$out_d/catalog.calls"
70 [[ ! -e "$o_vcf" ]] || { echo "Error: Refusing to overwrite '$o_vcf'." >&2; exit 1; }
78 touch "$o_fa" "$o_vcf"
190 > "$o_vcf"
192 echo "Wrote '$o_vcf'."
/dports/biology/stacks/stacks-2.4/src/
H A Dgstacks.h188 string o_vcf; variable
248 string& vcf_out() {return loc_.o_vcf;} in vcf_out()
H A Dgstacks.cc921 o_vcf.clear(); in clear()
2596 loc_.o_vcf = vcf_records.str(); in write_one_locus()