Searched refs:ATAC_REV (Results 1 – 5 of 5) sorted by relevance
183 case GTAG_REV: case GCAG_REV: case ATAC_REV: return SENSE_ANTI; in Intron_sensedir()210 case ATAC_REV: return 1; in Intron_level()225 case ATAC_REV: return "AT-AC, rev"; in Intron_type_string()
33 #define ATAC_REV 0x01 /* 000001 GT-AT */ macro
159 intron_score_array_antisense_final[ATAC_REV] = FINAL_ATAC_INTRON; in intron_score_setup()163 intron_score_array_antisense_prelim[ATAC_REV] = ATAC_INTRON; in intron_score_setup()171 intron_score_array_either_final[ATAC_REV] = FINAL_ATAC_INTRON; in intron_score_setup()178 intron_score_array_either_prelim[ATAC_REV] = ATAC_INTRON; in intron_score_setup()313 case ATAC_REV: scoreI = finalp == true ? FINAL_ATAC_INTRON : ATAC_INTRON; break;320 case ATAC_FWD: case ATAC_REV: scoreI = finalp == true ? FINAL_ATAC_INTRON : ATAC_INTRON; break;
1925 case ATAC_REV: pair->comp = REV_ATAC_INTRON_COMP; break; in assign_gap_types()1996 case ATAC_REV: pair->comp = REV_ATAC_INTRON_COMP; break; in assign_gap_types()2191 case ATAC_REV: pair->comp = REV_ATAC_INTRON_COMP; break; in assign_intron_probs()2262 case ATAC_REV: pair->comp = REV_ATAC_INTRON_COMP; break; in assign_intron_probs()2478 case ATAC_REV: comp = REV_ATAC_INTRON_COMP; break; in add_dualbreak()2628 case ATAC_REV: *comp = REV_ATAC_INTRON_COMP; break; in add_intron()9769 semicanonical_introntype_1 = ATAC_REV; in traverse_dual_genome_gap()
4699 case ATAC_REV: this->comp = REV_ATAC_INTRON_COMP; break; in Pair_fix_cdna_direction_array()