CM_TR_EMIT_MX (reference) in projects: dports

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Searched refs:CM_TR_EMIT_MX (Results 1 – 3 of 3) sorted by relevance

/dports/biology/infernal/infernal-1.1.3/src/
H A D	infernal.h	1447 } CM_TR_EMIT_MX; typedef 1896 …CM_TR_EMIT_MX trnb_emx; / growable truncated non-banded emit matrix for residue posterior … 2685 …ple, CM_TR_MX mx, CM_TR_SHADOW_MX shmx, CM_TR_MX post_mx, CM_TR_EMIT_MX emit_mx, E… 2691 …preset_mode, int pass_idx, CM_TR_MX mx, CM_TR_SHADOW_MX shmx, CM_TR_EMIT_MX emit_mx, i… 2700 …L, float size_limit, char preset_mode, int do_check, CM_TR_MX post, CM_TR_EMIT_MX emit_mx); 2702 extern int cm_TrPostCode (CM_t cm, char errbuf, int L, CM_TR_EMIT_MX … 2867 extern CM_TR_EMIT_MX cm_tr_emit_mx_Create (CM_t cm); 2868 extern int cm_tr_emit_mx_GrowTo (CM_t cm, CM_TR_EMIT_MX mx, char errbuf, int L,… 2869 extern int cm_tr_emit_mx_Dump (FILE ofp, CM_t cm, CM_TR_EMIT_MX mx, char mode… 2870 extern void cm_tr_emit_mx_Destroy (CM_TR_EMIT_MX mx);
H A D	cm_mx.c	`4448 CM_TR_EMIT_MX * 4452 CM_TR_EMIT_MX mx = NULL; in cm_tr_emit_mx_Create() 4460 ESL_ALLOC(mx, sizeof(CM_TR_EMIT_MX)); in cm_tr_emit_mx_Create() 4605 cm_tr_emit_mx_GrowTo(CM_t cm, CM_TR_EMIT_MX mx, char errbuf, int L, float size_limit) in cm_tr_emit_mx_GrowTo() 4734 cm_tr_emit_mx_Destroy(CM_TR_EMIT_MX mx) in cm_tr_emit_mx_Destroy() 4759 cm_tr_emit_mx_Dump(FILE ofp, CM_t cm, CM_TR_EMIT_MX mx, char mode, int print_mx) in cm_tr_emit_mx_Dump()`
H A D	cm_dpalign_trunc.c	128 …t pass_idx, int do_optacc, CM_TR_MX mx, CM_TR_SHADOW_MX shmx, CM_TR_EMIT_MX emit_mx, P… 179 …CM_TR_MX mx, CM_TR_SHADOW_MX shmx, CM_TR_EMIT_MX emit_mx, Parsetree_t *ret_tr, char ret_mode,… in cm_tr_alignT() 1028 CM_TR_EMIT_MX emit_mx, ESL_RANDOMNESS r, char ret_ppstr, Parsetree_t ret_tr, in cm_TrAlign() 4316 CM_TR_MX mx, CM_TR_SHADOW_MX shmx, CM_TR_EMIT_MX emit_mx, int ret_b, float ret_pp) in cm_TrOptAccAlign() 9018 …f, int L, float size_limit, char preset_mode, int do_check, CM_TR_MX post, CM_TR_EMIT_MX emit_mx) in cm_TrEmitterPosterior() 9601 cm_TrPostCode(CM_t cm, char errbuf, int L, CM_TR_EMIT_MX emit_mx, Parsetree_t tr, char *ret_pp… in cm_TrPostCode()