src - OpenGrok cross reference for /dports/biology/infernal/infernal-1.1.3/src/

Name		Date	Size	#Lines	LOC
..		03-May-2022	-
impl_sse/	H	19-Nov-2019	-	10,350	6,945
Makefile.in	H A D	03-May-2022	6.5 KiB	270	219
Rfam.12.1.claninfo	H A D	19-Nov-2019	3.5 KiB	105	104
alphabet.c	H A D	19-Nov-2019	15.9 KiB	509	293
bandcyk-montecarlo-test.c	H A D	19-Nov-2019	5.5 KiB	156	103
bandcyk-truncation-test.c	H A D	19-Nov-2019	7.1 KiB	164	96
cm.c	H A D	19-Nov-2019	173 KiB	5,125	3,483
cm_alidisplay.c	H A D	19-Nov-2019	62.4 KiB	1,577	1,034
cm_alndata.c	H A D	19-Nov-2019	23.2 KiB	506	291
cm_dispatch.h	H A D	19-Nov-2019	2.2 KiB	53	38
cm_dpalign.c	H A D	19-Nov-2019	257.4 KiB	6,040	3,419
cm_dpalign_trunc.c	H A D	19-Nov-2019	485.1 KiB	10,460	6,870
cm_dpsearch.c	H A D	19-Nov-2019	189.9 KiB	4,448	3,106
cm_dpsearch_trunc.c	H A D	19-Nov-2019	174.6 KiB	3,893	2,754
cm_dpsmall.c	H A D	19-Nov-2019	255.1 KiB	7,121	4,199
cm_file.c	H A D	19-Nov-2019	194.8 KiB	3,760	2,328
cm_modelconfig.c	H A D	19-Nov-2019	34.4 KiB	806	332
cm_modelmaker.c	H A D	19-Nov-2019	81.4 KiB	2,042	1,160
cm_mx.c	H A D	19-Nov-2019	288.2 KiB	7,672	5,060
cm_p7_band.c	H A D	19-Nov-2019	100.4 KiB	2,501	1,403
cm_p7_domaindef.c	H A D	19-Nov-2019	23.9 KiB	582	227
cm_p7_modelconfig_trunc.c	H A D	19-Nov-2019	5.2 KiB	172	82
cm_p7_modelmaker.c	H A D	19-Nov-2019	21 KiB	584	316
cm_parsetree.c	H A D	19-Nov-2019	188.2 KiB	4,473	2,941
cm_pipeline.c	H A D	19-Nov-2019	225.7 KiB	4,864	2,961
cm_qdband.c	H A D	19-Nov-2019	39.1 KiB	1,087	543
cm_submodel.c	H A D	19-Nov-2019	174 KiB	4,420	2,818
cm_tophits.c	H A D	19-Nov-2019	155.2 KiB	3,633	2,478
cm_trunc.c	H A D	19-Nov-2019	34.9 KiB	785	377
cmalign.c	H A D	19-Nov-2019	120.4 KiB	2,525	1,680
cmbuild.c	H A D	19-Nov-2019	155.7 KiB	3,265	2,187
cmcalibrate.c	H A D	19-Nov-2019	98.8 KiB	2,298	1,573
cmconvert.c	H A D	19-Nov-2019	7.7 KiB	162	101
cmemit.c	H A D	19-Nov-2019	32.7 KiB	757	543
cmfetch.c	H A D	19-Nov-2019	12.1 KiB	336	239
cmpress.c	H A D	19-Nov-2019	10.9 KiB	236	178
cmscan.c	H A D	19-Nov-2019	173.2 KiB	3,018	2,172
cmsearch.c	H A D	19-Nov-2019	167.9 KiB	3,085	2,052
cmsim.c	H A D	19-Nov-2019	32.2 KiB	815	527
cmstat.c	H A D	19-Nov-2019	20.2 KiB	384	331
config.h.in	H A D	19-Nov-2019	2.3 KiB	82	66
cp9-test.c	H A D	19-Nov-2019	5 KiB	116	84
cp9.c	H A D	19-Nov-2019	18.5 KiB	610	403
cp9_dp.c	H A D	19-Nov-2019	79.4 KiB	1,716	972
cp9_modelmaker.c	H A D	19-Nov-2019	105.3 KiB	2,849	1,666
cp9_mx.c	H A D	19-Nov-2019	8.6 KiB	255	148
cp9_trace.c	H A D	19-Nov-2019	49.2 KiB	1,432	977
default.prior	H A D	19-Nov-2019	7.6 KiB	439	438
display.c	H A D	19-Nov-2019	46.9 KiB	1,398	923
errors.c	H A D	19-Nov-2019	1.6 KiB	69	32
eweight.c	H A D	19-Nov-2019	23.1 KiB	679	332
hmmband.c	H A D	19-Nov-2019	244.6 KiB	5,586	3,505
hmmband.h	H A D	19-Nov-2019	5.3 KiB	117	77
infernal.h	H A D	19-Nov-2019	201.5 KiB	3,317	1,918
itest_brute.c	H A D	19-Nov-2019	67.6 KiB	1,116	745
logsum.c	H A D	19-Nov-2019	8 KiB	254	121
mpisupport.c	H A D	19-Nov-2019	113.2 KiB	1,940	1,151
nearzero.prior	H A D	19-Nov-2019	4.4 KiB	385	384
plus1.prior	H A D	19-Nov-2019	2.7 KiB	385	384
prior.c	H A D	19-Nov-2019	77.7 KiB	2,219	1,731
prior.h	H A D	19-Nov-2019	1.2 KiB	42	21
rna.null	H A D	19-Nov-2019	604	23	22
rnamat.c	H A D	19-Nov-2019	35.4 KiB	1,118	703
rnamat.h	H A D	19-Nov-2019	3.5 KiB	151	44
sa-Makefile.in	H A D	19-Nov-2019	2.6 KiB	121	100
stats.c	H A D	19-Nov-2019	21.6 KiB	745	431
stats.h	H A D	19-Nov-2019	1.9 KiB	55	37
sub_cm-test.c	H A D	19-Nov-2019	15.1 KiB	342	244
trcyk.c	H A D	19-Nov-2019	3.4 KiB	129	91
truncyk.c	H A D	19-Nov-2019	148.6 KiB	4,224	3,471
truncyk_check.c	H A D	19-Nov-2019	8.5 KiB	224	155
v056-to-v102-default.prior	H A D	19-Nov-2019	8.7 KiB	429	428