1/* @configure_input@ 2 * DO NOT EDIT config.h!! 3 * config.h is generated from config.h.in by autoconf. 4 * 5 * Configurable compile-time constants in INFERNAL. 6 * 7 * Because this header may configure the behavior of system headers 8 * (for example, LFS support), it must be included before any other 9 * header file. 10 * 11 * SRE, Sun Jun 3 20:22:38 2001 [St. Louis] 12 */ 13#ifndef CONFIGH_INCLUDED 14#define CONFIGH_INCLUDED 15 16/**************************************************************** 17 * This first section can be edited manually before compilation 18 ****************************************************************/ 19 20/* RAMLIMIT (in MB) defines how much memory we're 21 * allowed to expend on alignment algorithms without 22 * switching to more efficient memory forms - e.g. 23 * in smallcyk.c 24 */ 25#ifndef RAMLIMIT 26#define RAMLIMIT 0 27#endif 28 29/* SRE_CONLEVEL will prob move to squid somewhere. 30 * Set to 1 to activate contract checking, during debugging. 31 */ 32#define SRE_CONLEVEL 1 33#if (SRE_CONLEVEL >= 1) 34#include <assert.h> 35#endif 36 37#define CMSEQDBENV "BLASTDB" 38#define CMDBENV "RFAMDB" 39 40/***************************************************************** 41 * Everything else that follows is configured automatically 42 * by the ./configure script. DO NOT EDIT. 43 *****************************************************************/ 44 45/* Version info - set once for whole package in configure.ac 46 */ 47#undef INFERNAL_VERSION 48#undef INFERNAL_DATE 49#undef INFERNAL_COPYRIGHT 50#undef INFERNAL_LICENSE 51#undef INFERNAL_URL 52 53/* Information about location of alloca() 54 * Used by rigfilters/cm2hmm-1.0/MiscExceptions.cpp 55 * This function is known to have portability issues (including 56 * variable locations in system headers, and broken implementations 57 * on certain platforms) and may be problematic. Hopefully autoconf 58 * will prevent major issues. 59 */ 60#undef HAVE_ALLOCA_H 61 62/* Large file support (must precede any header file inclusion.) 63 */ 64#undef _LARGEFILE_SOURCE 65#undef _LARGEFILE64_SOURCE 66#undef _FILE_OFFSET_BITS 67 68 69/* Choice of optimized implementation (one and only one must be set) 70 * These are identically defined in HMMER p7_config.h.in, Easel esl_config.h.in 71 */ 72#undef eslENABLE_SSE 73#undef eslENABLE_VMX 74 75 76/* Optional parallel implementations */ 77#undef HAVE_MPI 78 79 80#endif /* CONFIGH_INCLUDED */ 81 82