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Searched refs:CREATE_OUTPUT_BAM_MD5_LONG_NAME (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/cmdline/
H A DStandardArgumentDefinitions.java28 public static final String CREATE_OUTPUT_BAM_MD5_LONG_NAME = "create-output-bam-md5"; field in StandardArgumentDefinitions
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/
H A DAbstractPrintReadsIntegrationTest.java53 args.add("--" + StandardArgumentDefinitions.CREATE_OUTPUT_BAM_MD5_LONG_NAME); in doFileToFile()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/engine/
H A DGATKTool.java81 @Argument(fullName=StandardArgumentDefinitions.CREATE_OUTPUT_BAM_MD5_LONG_NAME,
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/
H A DHaplotypeCallerIntegrationTest.java787 … argBuilder.add(StandardArgumentDefinitions.CREATE_OUTPUT_BAM_MD5_LONG_NAME, createBamoutMD5); in testOutputFileArgumentVariations()