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Searched refs:EMoleculeType (Results 1 – 10 of 10) sorted by relevance

/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/api/
H A Duniform_search.hpp115 enum EMoleculeType { enum in CSearchDatabase
123 CSearchDatabase(const string& dbname, EMoleculeType mol_type);
129 CSearchDatabase(const string& dbname, EMoleculeType mol_type,
140 void SetMoleculeType(EMoleculeType mol_type);
142 EMoleculeType GetMoleculeType() const;
193 EMoleculeType m_MolType; ///< molecule type
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/api/
H A Duniform_search.hpp115 enum EMoleculeType { enum in CSearchDatabase
123 CSearchDatabase(const string& dbname, EMoleculeType mol_type);
129 CSearchDatabase(const string& dbname, EMoleculeType mol_type,
140 void SetMoleculeType(EMoleculeType mol_type);
142 EMoleculeType GetMoleculeType() const;
193 EMoleculeType m_MolType; ///< molecule type
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/api/
H A Duniform_search.cpp49 CSearchDatabase::CSearchDatabase(const string& dbname, EMoleculeType mol_type) in BEGIN_SCOPE()
55 CSearchDatabase::CSearchDatabase(const string& dbname, EMoleculeType mol_type, in CSearchDatabase()
76 CSearchDatabase::SetMoleculeType(EMoleculeType mol_type) in SetMoleculeType()
81 CSearchDatabase::EMoleculeType
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/
H A Duniform_search.cpp49 CSearchDatabase::CSearchDatabase(const string& dbname, EMoleculeType mol_type) in BEGIN_SCOPE()
55 CSearchDatabase::CSearchDatabase(const string& dbname, EMoleculeType mol_type, in CSearchDatabase()
76 CSearchDatabase::SetMoleculeType(EMoleculeType mol_type) in SetMoleculeType()
81 CSearchDatabase::EMoleculeType
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/blastinput/
H A Dblast_args.hpp890 typedef CSearchDatabase::EMoleculeType EMoleculeType; typedef in CBlastDatabaseArgs
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/blastinput/
H A Dblast_args.hpp890 typedef CSearchDatabase::EMoleculeType EMoleculeType; typedef in CBlastDatabaseArgs
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/blast/
H A Dblast_app_util.cpp444 const CSearchDatabase::EMoleculeType mol = subject_is_protein in s_ImportDatabase()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/app/blast/
H A Dblast_app_util.cpp460 const CSearchDatabase::EMoleculeType mol = subject_is_protein in s_ImportDatabase()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/
H A Dblast_args.cpp1718 CBlastDatabaseArgs::EMoleculeType mol_type = Blast_SubjectIsNucleotide(opts.GetProgramType()) in ExtractAlgorithmOptions()
2359 EMoleculeType mol_type = Blast_SubjectIsNucleotide(opts.GetProgramType()) in ExtractAlgorithmOptions()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/
H A Dblast_args.cpp1718 CBlastDatabaseArgs::EMoleculeType mol_type = Blast_SubjectIsNucleotide(opts.GetProgramType()) in ExtractAlgorithmOptions()
2359 EMoleculeType mol_type = Blast_SubjectIsNucleotide(opts.GetProgramType()) in ExtractAlgorithmOptions()