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Searched refs:GCALLOC (Results 1 – 17 of 17) sorted by relevance

/dports/biology/cdbfasta/cdbfasta/gclib/
H A DGArgs.cpp39 GCALLOC(fmt[fmtcount+i].opt, 2); //one char length in GArgs()
52 GCALLOC(fmt[fmtcount+i].opt, 2); //one char length in GArgs()
84 GCALLOC(args[count].value, 2); in GArgs()
98 GCALLOC(args[count].opt, 2); in GArgs()
100 GCALLOC(args[count].value, 1); in GArgs()
112 GCALLOC(args[count].opt, 2); in GArgs()
H A DGBase.h110 #define GCALLOC(ptr,size) if (!GCalloc((pointer*)(&ptr),size)) \ macro
/dports/biology/cufflinks/cufflinks-2.2.1-89-gdc3b0cb/src/
H A DGArgs.cpp82 GCALLOC(args[count].value, 2); in parseArgs()
95 GCALLOC(args[count].opt, 2); in parseArgs()
99 GCALLOC(args[count].value,1);//so getOpt() functions would not return NULL in parseArgs()
179 GCALLOC(args[count].value,1); //do not return NULL in parseArgs()
247 GCALLOC(fmt, fmtcount*sizeof(fmtdef)); in GArgs()
H A DGBase.h156 #define GCALLOC(ptr,size) if (!GCalloc((pointer*)(&ptr),size)) \ macro
H A Dcuffcompare.cpp651 GCALLOC(qexovl,super->quexons.Count()*sizeof(int)); in compareLoci2R()
653 GCALLOC(rexovl,super->ruexons.Count()*sizeof(int)); in compareLoci2R()
701 GCALLOC(qinovl,super->qintrons.Count()*sizeof(int)); in compareLoci2R()
702 GCALLOC(qtpinovl,super->qintrons.Count()*sizeof(int)); in compareLoci2R()
708 GCALLOC(rinovl,super->rintrons.Count()*sizeof(int)); in compareLoci2R()
709 GCALLOC(rtpinovl,super->rintrons.Count()*sizeof(int)); in compareLoci2R()
/dports/biology/stringtie/stringtie-2.1.1/gclib/
H A DGArgs.cpp95 GCALLOC(args[count].value, 2); in parseArgs()
108 GCALLOC(args[count].opt, 2); in parseArgs()
112 GCALLOC(args[count].value,1);//so getOpt() functions would not return NULL in parseArgs()
195 GCALLOC(args[count].value,1); //do not return NULL in parseArgs()
263 GCALLOC(fmt, fmtcount*sizeof(fmtdef)); in GArgs()
H A DGBase.h157 #define GCALLOC(ptr,size) if (!GCalloc((pointer*)(&ptr),size)) \ macro
/dports/biology/libgff/libgff-2.0.0/src/
H A DGArgs.cpp95 GCALLOC(args[count].value, 2); in parseArgs()
108 GCALLOC(args[count].opt, 2); in parseArgs()
112 GCALLOC(args[count].value,1);//so getOpt() functions would not return NULL in parseArgs()
198 GCALLOC(args[count].value,1); //do not return NULL in parseArgs()
266 GCALLOC(fmt, fmtcount*sizeof(fmtdef)); in GArgs()
/dports/biology/gffread/gffread-0.12.7/gclib/
H A DGArgs.cpp95 GCALLOC(args[count].value, 2); in parseArgs()
108 GCALLOC(args[count].opt, 2); in parseArgs()
112 GCALLOC(args[count].value,1);//so getOpt() functions would not return NULL in parseArgs()
198 GCALLOC(args[count].value,1); //do not return NULL in parseArgs()
266 GCALLOC(fmt, fmtcount*sizeof(fmtdef)); in GArgs()
H A DGapAssem.cpp39 GCALLOC(ofs, seqlen * sizeof(short)); in GASeq()
41 GCALLOC(cov,seqlen*sizeof(int)); in GASeq()
53 GCALLOC(ofs, seqlen * sizeof(short)); in GASeq()
55 GCALLOC(cov,seqlen*sizeof(int)); in GASeq()
66 GCALLOC(ofs, seqlen * sizeof(short)); in GASeq()
68 GCALLOC(cov,seqlen*sizeof(int)); in GASeq()
79 GCALLOC(ofs, seqlen * sizeof(short)); in GASeq()
81 GCALLOC(cov,seqlen*sizeof(int)); in GASeq()
H A DGAlnExtend.h274 GCALLOC(last_seq2_off[0], ((max_d + max_d + 6) * sizeof(int) * 2)); in CGreedyAlignData()
280 GCALLOC(max_score, (sizeof(int) * (max_d + 1 + d_diff))); in CGreedyAlignData()
292 GCALLOC(last_seq2_off[0], ((max_d + max_d + 6) * sizeof(int) * 2)); in reset()
296 GCALLOC(max_score, (sizeof(int) * (max_d + 1 + d_diff))); in reset()
H A DGapAssem.h100 GCALLOC(ofs, seqlen * sizeof(short)); in FastaSeq()
102 GCALLOC(cov,seqlen*sizeof(int)); in FastaSeq()
H A DGBase.h179 #define GCALLOC(ptr,size) if (!GCalloc((pointer*)(&ptr),size)) \ macro
H A DGAlnExtend.cpp587 GCALLOC(xc, (a_num*b_num)); in init()
/dports/biology/stringtie/stringtie-2.1.1/
H A Drlink.h398 GCALLOC(nextpat,cno*sizeof(CTreePat *)); in nodeno()
404 GCALLOC(nextpat,cno*sizeof(CTreePat *)); in setchilds()
H A Drlink.cpp12293 GCALLOC(tr2no[s],bundle[sno].Count()*sizeof(CTreePat *)); in build_graphs()
13088 GCALLOC(tr2no[s],bundle[sno].Count()*sizeof(CTreePat *)); in build_merge()
/dports/biology/libgff/libgff-2.0.0/include/
H A DGBase.h170 #define GCALLOC(ptr,size) if (!GCalloc((pointer*)(&ptr),size)) \ macro