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Searched refs:Genome_fill_buffer (Results 1 – 5 of 5) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgenome.h53 Genome_fill_buffer (Chrnum_T *chrnum, int *nunknowns, T this, Univcoord_T left, Chrpos_T length, ch…
H A Dsnpindex.c343 Genome_fill_buffer(&chrnum,&nunknowns,genome,/*left*/startposition,length, in process_snp_block()
H A Dpair.c2107 …Genome_fill_buffer(&chrnum,&nunknowns,genome,left,DONOR_MODEL_LEFT_MARGIN+DONOR_MODEL_RIGHT_MARGIN… in donor_score()
2121 …Genome_fill_buffer(&chrnum,&nunknowns,genome,left,DONOR_MODEL_LEFT_MARGIN+DONOR_MODEL_RIGHT_MARGIN… in donor_score()
2149 …Genome_fill_buffer(&chrnum,&nunknowns,genome,left,ACCEPTOR_MODEL_LEFT_MARGIN+ACCEPTOR_MODEL_RIGHT_… in acceptor_score()
2164 …Genome_fill_buffer(&chrnum,&nunknowns,genome,left,ACCEPTOR_MODEL_LEFT_MARGIN+ACCEPTOR_MODEL_RIGHT_… in acceptor_score()
H A Dgenome.c10692 Genome_fill_buffer (Chrnum_T *chrnum, int *nunknowns, T this, Univcoord_T left, Chrpos_T length, ch… in Genome_fill_buffer() function
/dports/biology/gmap/gmap-2020-09-12/
H A DChangeLog13766 * genome.c: Made Genome_fill_buffer refer to its local genome argument, not
18484 simplified version of Genome_fill_buffer that does not check chromosome
19420 * gdiag.c, gsnap-to-iit.c: Using new interface to Genome_fill_buffer
19467 * genome.c, genome.h: Added function Genome_blocks. Made Genome_fill_buffer
20003 * gdiag.c, gsnap-to-iit.c: Using new interface to Genome_fill_buffer
20151 * stage1hr.c: Using new interfaces to Genome_fill_buffer and Stage3_new
20551 * genome.c, genome.h: Made Genome_fill_buffer return a false value if it
20761 * genome.c: In Genome_fill_buffer, checking for negative starting