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Searched refs:INFINITE_INITIAL_GAP_PENALTY (Results 1 – 3 of 3) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Ddynprog.h14 #define INFINITE_INITIAL_GAP_PENALTY 1 /* Prevents any gaps on row 0 or column 0 */ macro
H A Ddynprog_simd.c2455 #ifndef INFINITE_INITIAL_GAP_PENALTY in Dynprog_simd_8_nonavx2()
2484 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8_nonavx2()
2710 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8_nonavx2()
2977 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8()
2989 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8()
3159 #ifndef INFINITE_INITIAL_GAP_PENALTY in Dynprog_simd_8()
3194 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8()
3465 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_8()
5953 #ifndef INFINITE_INITIAL_GAP_PENALTY in Dynprog_simd_16_nonavx2()
5981 #elif defined(INFINITE_INITIAL_GAP_PENALTY) in Dynprog_simd_16_nonavx2()
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/dports/biology/gmap/gmap-2020-09-12/
H A DChangeLog4520 INFINITE_INITIAL_GAP_PENALTY. Added filters on lband for first column of