Home
last modified time | relevance | path

Searched refs:MappingQualityZero (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/annotator/
H A DMappingQualityZeroUnitTest.java29 final InfoFieldAnnotation cov = new MappingQualityZero(); in testAllNull()
37 final InfoFieldAnnotation cov = new MappingQualityZero(); in testNullLikelihoods()
75 …final Map<String, Object> annotate = new MappingQualityZero().annotate(referenceContext, vc, likel… in testLikelihoods()
92 …final Map<String, Object> annotate = new MappingQualityZero().annotate(referenceContext, vc, likel… in testEmptyLikelihoods()
H A DVariantAnnotatorEngineUnitTest.java186 …tCommonInfo().getAttribute(VCFConstants.MAPPING_QUALITY_ZERO_KEY), MappingQualityZero.formattedVal… in testAllAnnotations()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/
H A DMappingQualityZero.java38 public final class MappingQualityZero extends InfoFieldAnnotation { class
/dports/biology/ddocent/dDocent-2.7.8/Outdated/
H A DdDocent.GATK425 -A Coverage -A QualByDepth -A MappingQualityRankSumTest -A ReadPosRankSumTest -A MappingQualityZero…