| .. | | 19-Feb-2021 | - |
| allelespecific/ | H | 19-Feb-2021 | - | 2,059 | 1,205 |
| AS_StrandBiasMutectAnnotation.java | H A D | 19-Feb-2021 | 2 KiB | 50 | 38 |
| AlleleFraction.java | H A D | 19-Feb-2021 | 4.2 KiB | 74 | 46 |
| Annotation.java | H A D | 19-Feb-2021 | 248 | 8 | 3 |
| AnnotationUtils.java | H A D | 19-Feb-2021 | 4.8 KiB | 107 | 59 |
| BaseQuality.java | H A D | 19-Feb-2021 | 2.4 KiB | 54 | 36 |
| BaseQualityHistogram.java | H A D | 19-Feb-2021 | 2.8 KiB | 70 | 53 |
| BaseQualityRankSumTest.java | H A D | 19-Feb-2021 | 2.8 KiB | 46 | 26 |
| ChromosomeCounts.java | H A D | 19-Feb-2021 | 2.9 KiB | 69 | 41 |
| ClippingRankSumTest.java | H A D | 19-Feb-2021 | 2.8 KiB | 43 | 21 |
| CountNs.java | H A D | 19-Feb-2021 | 2.9 KiB | 63 | 45 |
| Coverage.java | H A D | 19-Feb-2021 | 3.3 KiB | 61 | 35 |
| DepthPerAlleleBySample.java | H A D | 19-Feb-2021 | 5 KiB | 91 | 58 |
| DepthPerSampleHC.java | H A D | 19-Feb-2021 | 5.1 KiB | 96 | 59 |
| ExcessHet.java | H A D | 19-Feb-2021 | 11.8 KiB | 266 | 159 |
| FisherStrand.java | H A D | 19-Feb-2021 | 6 KiB | 123 | 69 |
| FragmentLength.java | H A D | 19-Feb-2021 | 2.1 KiB | 46 | 29 |
| GenotypeAnnotation.java | H A D | 19-Feb-2021 | 1.7 KiB | 40 | 18 |
| GenotypeSummaries.java | H A D | 19-Feb-2021 | 3 KiB | 70 | 47 |
| HeterozygosityCalculator.java | H A D | 19-Feb-2021 | 5 KiB | 121 | 79 |
| InbreedingCoeff.java | H A D | 19-Feb-2021 | 5.8 KiB | 109 | 71 |
| InfoFieldAnnotation.java | H A D | 19-Feb-2021 | 1.8 KiB | 43 | 23 |
| LikelihoodRankSumTest.java | H A D | 19-Feb-2021 | 3.3 KiB | 51 | 30 |
| MappingQuality.java | H A D | 19-Feb-2021 | 1.8 KiB | 46 | 30 |
| MappingQualityRankSumTest.java | H A D | 19-Feb-2021 | 3.3 KiB | 46 | 20 |
| MappingQualityZero.java | H A D | 19-Feb-2021 | 3.3 KiB | 70 | 44 |
| OrientationBiasReadCounts.java | H A D | 19-Feb-2021 | 8.6 KiB | 172 | 105 |
| OriginalAlignment.java | H A D | 19-Feb-2021 | 3.9 KiB | 74 | 52 |
| PedigreeAnnotation.java | H A D | 19-Feb-2021 | 4.8 KiB | 105 | 64 |
| PerAlleleAnnotation.java | H A D | 19-Feb-2021 | 3.2 KiB | 71 | 48 |
| PossibleDeNovo.java | H A D | 19-Feb-2021 | 7.9 KiB | 149 | 114 |
| QualByDepth.java | H A D | 19-Feb-2021 | 6.9 KiB | 141 | 84 |
| RMSMappingQuality.java | H A D | 19-Feb-2021 | 23.7 KiB | 444 | 328 |
| RankSumTest.java | H A D | 19-Feb-2021 | 4.7 KiB | 111 | 65 |
| ReadPosRankSumTest.java | H A D | 19-Feb-2021 | 5.7 KiB | 82 | 48 |
| ReadPosition.java | H A D | 19-Feb-2021 | 3.4 KiB | 60 | 37 |
| ReferenceBases.java | H A D | 19-Feb-2021 | 3.7 KiB | 76 | 55 |
| SampleList.java | H A D | 19-Feb-2021 | 2.5 KiB | 58 | 41 |
| StandardAnnotation.java | H A D | 19-Feb-2021 | 212 | 8 | 3 |
| StandardHCAnnotation.java | H A D | 19-Feb-2021 | 243 | 8 | 3 |
| StandardMutectAnnotation.java | H A D | 19-Feb-2021 | 235 | 8 | 3 |
| StrandBiasBySample.java | H A D | 19-Feb-2021 | 5.4 KiB | 116 | 68 |
| StrandBiasTest.java | H A D | 19-Feb-2021 | 10.2 KiB | 245 | 155 |
| StrandOddsRatio.java | H A D | 19-Feb-2021 | 8.6 KiB | 184 | 51 |
| TandemRepeat.java | H A D | 19-Feb-2021 | 3.4 KiB | 66 | 48 |
| UniqueAltReadCount.java | H A D | 19-Feb-2021 | 3.9 KiB | 70 | 42 |
| VariantAnnotation.java | H A D | 19-Feb-2021 | 386 | 20 | 9 |
| VariantAnnotator.java | H A D | 19-Feb-2021 | 14.1 KiB | 296 | 137 |
| VariantAnnotatorEngine.java | H A D | 19-Feb-2021 | 28 KiB | 529 | 347 |
| VariantOverlapAnnotator.java | H A D | 19-Feb-2021 | 9.7 KiB | 216 | 108 |