Searched refs:SINGLE_EXTEND_HIGHQ (Results 1 – 4 of 4) sorted by relevance
66 #define SINGLE_EXTEND_HIGHQ -3 macro
124 …LMATCH*matches + MISMATCH_HIGHQ*mismatches + SINGLE_OPEN_HIGHQ*qopens + SINGLE_EXTEND_HIGHQ*qindels in Dynprog_score()125 + SINGLE_OPEN_HIGHQ*topens + SINGLE_EXTEND_HIGHQ*tindels; in Dynprog_score()
462 extend = SINGLE_EXTEND_HIGHQ; in Dynprog_single_gap()
3342 extend = SINGLE_EXTEND_HIGHQ; in Dynprog_genome_gap()