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Searched refs:Stage3_new (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dstage3.h295 Stage3_new (struct Pair_T *pairarray, List_T pairs, int npairs, int goodness,
H A Dgmap.c1371 } else if ((stage3 = Stage3_new(pairarray,pairs,npairs,goodness,cdna_direction,sensedir, in update_stage3list()
1546 } else if ((stage3 = Stage3_new(pairarray,pairs,npairs,goodness,cdna_direction,sensedir, in stage3_from_usersegment()
1942 } else if ((stage3 = Stage3_new(pairarray,pairs,npairs,goodness,cdna_direction,sensedir, in stage3_from_gregions()
H A Dstage3.c5899 Stage3_new (struct Pair_T *pairarray, List_T pairs, int npairs, int goodness, int cdna_direction, i… in Stage3_new() function
6069 return Stage3_new(pairarray,pairs,npairs,goodness,cdna_direction,sensedir, in Stage3_new_from_pairs()
18913 if ((stage3 = Stage3_new(pairarray,pairs,npairs,goodness,this->cdna_direction,this->sensedir, in Stage3_split()
18944 if ((stage3 = Stage3_new(pairarray,pairs,npairs,goodness,this->cdna_direction,this->sensedir, in Stage3_split()
/dports/biology/gmap/gmap-2020-09-12/
H A DChangeLog2082 * stage3.c: Making explicit check for npairs being 0 in Stage3_new
4738 Stage3_new to MALLOC_OUT.
5610 * gmap.c: Using new interface to Stage3_compute and Stage3_new. No longer
16861 * stage1hr.c, stage3hr.c: Allowing Substring_new and Stage3_new to return
20151 * stage1hr.c: Using new interfaces to Genome_fill_buffer and Stage3_new