Home
last modified time | relevance | path

Searched refs:__Pyx_TraceDeclarations (Results 1 – 25 of 35) sorted by relevance

12

/dports/biology/py-pysam/pysam-0.18.0/pysam/
H A Dlibcfaidx.c2566 __Pyx_TraceDeclarations in __pyx_f_5pysam_9libcfaidx_makeFastqProxy()
2661 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile___cinit__()
2797 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_2is_open()
2863 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_4__len__()
3035 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_6_open()
3821 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_8close()
3908 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_10__dealloc__()
3995 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_12__enter__()
4120 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_14__exit__()
4214 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libcfaidx_9FastaFile_6closed___get__()
[all …]
H A Dlibcalignedsegment.c4822 __Pyx_TraceDeclarations in __pyx_gb_5pysam_18libcalignedsegment_2generator()
4979 __Pyx_TraceDeclarations in __pyx_gb_5pysam_18libcalignedsegment_5generator1()
5106 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_c_mul()
5164 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_tolower()
5251 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_toupper()
5338 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_strand_mark_char()
5479 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_pileup_base_qual_skip()
5597 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_map_typecode_htslib_to_python()
5683 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_map_typecode_python_to_htslib()
5767 __Pyx_TraceDeclarations in __pyx_f_5pysam_18libcalignedsegment_update_bin()
[all …]
H A Dlibcbcf.c4800 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_bcf_str_cache_get_charptr()
4989 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_comb()
5257 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_bcf_geno_combinations()
5305 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_check_header_id()
5368 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_is_gt_fmt()
5419 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_bcf_genotype_count()
5704 __Pyx_TraceDeclarations in __pyx_gb_5pysam_7libcbcf_19char_array_to_tuple_2generator28()
5782 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_char_array_to_tuple()
6053 __Pyx_TraceDeclarations in __pyx_gb_5pysam_7libcbcf_19bcf_array_to_object_2generator29()
6216 __Pyx_TraceDeclarations in __pyx_f_5pysam_7libcbcf_bcf_array_to_object()
[all …]
H A Dlibchtslib.c2712 __Pyx_TraceDeclarations in __pyx_f_5pysam_10libchtslib_set_verbosity()
2784 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_set_verbosity()
2822 __Pyx_TraceDeclarations in __pyx_f_5pysam_10libchtslib_get_verbosity()
2881 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_2get_verbosity()
2999 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_5HFile___init__()
3063 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_5HFile_2__dealloc__()
3143 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_5HFile_6closed___get__()
3196 __Pyx_TraceDeclarations in __pyx_f_5pysam_10libchtslib_5HFile__open()
3440 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_5HFile_4close()
3594 __Pyx_TraceDeclarations in __pyx_pf_5pysam_10libchtslib_5HFile_6fileno()
[all …]
H A Dlibctabix.c3491 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser___init__()
3556 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser_2set_encoding()
3622 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser_4get_encoding()
3671 __Pyx_TraceDeclarations in __pyx_f_5pysam_9libctabix_6Parser_parse()
3802 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser_6__call__()
3870 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser_8__reduce_cython__()
4106 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_6Parser_10__setstate_cython__()
4157 __Pyx_TraceDeclarations in __pyx_f_5pysam_9libctabix_7asTuple_parse()
4247 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_7asTuple___reduce_cython__()
4483 __Pyx_TraceDeclarations in __pyx_pf_5pysam_9libctabix_7asTuple_2__setstate_cython__()
[all …]
H A Dlibcalignmentfile.c4061 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_build_header_line()
4515 __Pyx_TraceDeclarations in __pyx_f_5pysam_17libcalignmentfile_makeAlignmentHeader()
4636 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_2read_failure_reason()
4746 __Pyx_TraceDeclarations in __pyx_f_5pysam_17libcalignmentfile_fill_AlignmentHeader_from_list()
4794 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader___cinit__()
4857 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_2__init__()
5023 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_4_from_text_and_lengths()
5738 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_6from_text()
6249 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_8from_dict()
7461 __Pyx_TraceDeclarations in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_10from_references()
[all …]
H A Dlibcsamfile.c2576 __Pyx_TraceDeclarations in __pyx_pf_5pysam_11libcsamfile_7Samfile___reduce_cython__()
2637 __Pyx_TraceDeclarations in __pyx_pf_5pysam_11libcsamfile_7Samfile_2__setstate_cython__()
2697 __Pyx_TraceDeclarations in __pyx_pf_5pysam_11libcsamfile_11AlignedRead___reduce_cython__()
2758 __Pyx_TraceDeclarations in __pyx_pf_5pysam_11libcsamfile_11AlignedRead_2__setstate_cython__()
2820 __Pyx_TraceDeclarations in __pyx_pf_7cpython_5array_5array___getbuffer__()
3066 __Pyx_TraceDeclarations in __pyx_pf_7cpython_5array_5array_2__releasebuffer__()
3111 __Pyx_TraceDeclarations in __pyx_f_7cpython_5array_clone()
3216 __Pyx_TraceDeclarations in __pyx_f_7cpython_5array_copy()
3291 __Pyx_TraceDeclarations in __pyx_f_7cpython_5array_extend_buffer()
3375 __Pyx_TraceDeclarations in __pyx_f_7cpython_5array_extend()
[all …]
/dports/science/py-pymatgen/pymatgen-2022.0.15/pymatgen/optimization/
H A Dneighbors.c2931 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_safe_malloc()
3059 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_safe_realloc()
3365 __Pyx_TraceDeclarations in __pyx_pf_12optimization_9neighbors_find_points_in_spheres()
6117 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_distance2()
6223 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_get_cube_neighbors()
6815 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_get_bounds()
6987 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_get_frac_coords()
7087 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_matmul()
7215 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_matrix_inv()
7348 __Pyx_TraceDeclarations in __pyx_f_12optimization_9neighbors_matrix_det()
[all …]
/dports/math/py-CyLP/CyLP-0.91.4/cylp/cy/
H A DCyClpSimplex.cpp4080 __Pyx_TraceDeclarations
4303 __Pyx_TraceDeclarations
4347 __Pyx_TraceDeclarations
4420 __Pyx_TraceDeclarations
4564 __Pyx_TraceDeclarations
4704 __Pyx_TraceDeclarations
5034 __Pyx_TraceDeclarations
5373 __Pyx_TraceDeclarations
5596 __Pyx_TraceDeclarations
5660 __Pyx_TraceDeclarations
[all …]
H A DCyClpPrimalColumnPivotBase.cpp2651 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunPivotColumn()
2701 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunClone()
2743 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunSaveWeights()
2800 __Pyx_TraceDeclarations in __pyx_pf_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase___init__()
2863 __Pyx_TraceDeclarations in __pyx_pf_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_2__dealloc__()
2913 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_pivotColumn()
2962 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_clone()
3013 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_saveWeights()
3058 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_model()
3100 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_setModel()
[all …]
H A DCyClpDualRowPivotBase.cpp2737 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunPivotRow()
2787 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunDualPivotClone()
2830 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunUpdateWeights()
2874 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunUpdatePrimalSolution()
2956 __Pyx_TraceDeclarations in __pyx_pf_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase___init__()
3000 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_pivotRow()
3049 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_clone()
3101 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_updateWeights()
3149 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_updatePrimalSolution()
3203 __Pyx_TraceDeclarations in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_model()
[all …]
/dports/biology/py-macs2/MACS-2.2.7.1/MACS2/IO/
H A DPairedEndTrack.c2806 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI___init__()
3005 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_add_loc()
3438 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_2add_loc()
3474 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_destroy()
3851 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_4destroy()
3885 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI___expand__()
4013 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_6__expand__()
4051 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_set_rlengths()
4338 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_8set_rlengths()
4374 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_get_rlengths()
[all …]
H A DParser.c3116 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser_guess_parser()
3602 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6Parser_guess_parser()
3650 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser___fw_binary_parse_le()
3997 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser___fw_binary_parse_be()
4355 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser___pe_binary_parse_le()
4641 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser___pe_binary_parse_be()
4977 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6Parser_17StrandFormatError___init__()
5048 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6Parser_17StrandFormatError_2__str__()
5224 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6Parser_13GenericParser___init__()
5614 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6Parser_13GenericParser___skip_first_commentlines()
[all …]
H A DFixWidthTrack.c2890 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack___init__()
3116 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_destroy()
3651 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_2destroy()
3686 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_add_loc()
4158 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_4add_loc()
4193 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack___expand__()
4287 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_finalize()
4664 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_6finalize()
4702 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_set_rlengths()
4989 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_8set_rlengths()
[all …]
H A DScoreTrack.c3298 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_int_max()
3331 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_int_min()
3365 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_get_pscore()
3642 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_logLR_asym()
3885 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_logLR_sym()
4127 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_get_logFE()
4174 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_10ScoreTrack_get_subtraction()
4232 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack___init__()
4373 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack_2add_chromosome()
4619 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack_4add()
[all …]
H A DPeakIO.c2452 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6PeakIO_subpeak_letters()
2703 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent___init__()
2845 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent_2__getitem__()
3225 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent_4__setitem__()
3584 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent_6__str__()
3693 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent_8__reduce_cython__()
3984 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_11PeakContent_10__setstate_cython__()
4047 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_6PeakIO___init__()
4107 __Pyx_TraceDeclarations in __pyx_f_5MACS2_2IO_6PeakIO_6PeakIO_add()
4615 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_2IO_6PeakIO_6PeakIO_2add()
[all …]
/dports/biology/py-macs2/MACS-2.2.7.1/MACS2/
H A DProb.c2225 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_pnorm()
2381 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_4Prob_pnorm()
2418 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_factorial()
2550 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_4Prob_2factorial()
2588 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_poz()
2835 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_ex20()
2918 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_chisq_pvalue_e()
3285 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_4Prob_4chisq_pvalue_e()
3327 __Pyx_TraceDeclarations in __pyx_f_5MACS2_4Prob_chisq_logp_e()
3732 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_4Prob_6chisq_logp_e()
[all …]
H A DPeakModel.c2866 __Pyx_TraceDeclarations in __pyx_f_5MACS2_9PeakModel_median()
3037 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_median()
3133 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_23NotEnoughPairsException___init__()
3193 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_23NotEnoughPairsException_2__str__()
3328 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_9PeakModel___init__()
3540 __Pyx_TraceDeclarations in __pyx_f_5MACS2_9PeakModel_9PeakModel_build()
4110 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_9PeakModel_2build()
4161 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_9PeakModel_9PeakModel_4__str__()
4314 __Pyx_TraceDeclarations in __pyx_f_5MACS2_9PeakModel_9PeakModel___paired_peak_model()
5645 __Pyx_TraceDeclarations in __pyx_f_5MACS2_9PeakModel_9PeakModel___model_add_line()
[all …]
H A DStatistics.c1667 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail___init__()
1721 __Pyx_TraceDeclarations in __pyx_f_5MACS2_10Statistics_18P_Score_Upper_Tail_get_pscore()
2093 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_2get_pscore()
2141 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_4__reduce_cython__()
2373 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_6__setstate_cython__()
2436 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym___init__()
2490 __Pyx_TraceDeclarations in __pyx_f_5MACS2_10Statistics_10LogLR_Asym_get_logLR_asym()
2857 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym_2get_logLR_asym()
2905 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym_4__reduce_cython__()
3137 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym_6__setstate_cython__()
[all …]
H A DPileup.c2486 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_clean_up_ndarray()
2635 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_pileup_and_write()
3386 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_6Pileup_pileup_and_write()
3447 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_pileup_and_write_pe()
3984 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_6Pileup_2pileup_and_write_pe()
4043 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_unified_pileup_bdg()
4595 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_6Pileup_4unified_pileup_bdg()
4667 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_pileup_bdg_se()
5286 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_pileup_w_multiple_d_bdg()
6079 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Pileup_pileup_bdg_pe()
[all …]
H A DSignal.c2258 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_maxima()
2690 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_6Signal_maxima()
2756 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_internal_minima()
3170 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_sqrt()
3263 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_enforce_peakyness()
4169 __Pyx_TraceDeclarations in __pyx_pf_5MACS2_6Signal_2enforce_peakyness()
4236 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_is_valid_peak()
4371 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_too_flat()
4475 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_hard_clip()
4719 __Pyx_TraceDeclarations in __pyx_f_5MACS2_6Signal_enforce_valleys()
[all …]
/dports/lang/cython/Cython-0.29.24/Cython/Utility/
H A DProfile.c50 #define __Pyx_TraceDeclarations \ macro
177 #define __Pyx_TraceDeclarations macro
/dports/lang/cython/Cython-0.29.24/build/lib.dragonfly-6.3-DEVELOPMENT-x86_64-3.8/Cython/Utility/
H A DProfile.c50 #define __Pyx_TraceDeclarations \ macro
177 #define __Pyx_TraceDeclarations macro
/dports/lang/cython/stage/usr/local/lib/python3.8/site-packages/Cython/Utility/
H A DProfile.c50 #define __Pyx_TraceDeclarations \ macro
177 #define __Pyx_TraceDeclarations macro
/dports/lang/cython-devel/cython-2b1e743/Cython/Utility/
H A DProfile.c50 #define __Pyx_TraceDeclarations \ macro
198 #define __Pyx_TraceDeclarations macro

12