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Searched refs:__pyx_v_lvl2_max_gap (Results 1 – 4 of 4) sorted by relevance

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H A DCallPeakUnitPrecompiled.c19436 int __pyx_v_lvl2_max_gap = ((int)0x190); in __pyx_f_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_call_broadpeaks() local
19482 __pyx_v_lvl2_max_gap = __pyx_optional_args->lvl2_max_gap; in __pyx_f_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_call_broadpeaks()
19507 …__pyx_t_5 = __Pyx_PyInt_From_int(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 145… in __pyx_f_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_call_broadpeaks()
19735 __pyx_t_12.max_gap = __pyx_v_lvl2_max_gap; in __pyx_f_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_call_broadpeaks()
20680 int __pyx_v_lvl2_max_gap; in __pyx_pw_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_11call_broadpeaks() local
20786 …__pyx_v_lvl2_max_gap = __Pyx_PyInt_As_int(values[5]); if (unlikely((__pyx_v_lvl2_max_gap == (int)-… in __pyx_pw_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_11call_broadpeaks()
20788 __pyx_v_lvl2_max_gap = ((int)0x190); in __pyx_pw_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_11call_broadpeaks()
20804 … __pyx_v_lvl2_cutoff_s, __pyx_v_min_length, __pyx_v_lvl1_max_gap, __pyx_v_lvl2_max_gap, __pyx_v_au… in __pyx_pw_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_11call_broadpeaks()
20825 __pyx_t_2.lvl2_max_gap = __pyx_v_lvl2_max_gap; in __pyx_pf_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups_10call_broadpeaks()
22295 …__pyx_t_5 = __Pyx_PyInt_From_int(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 172… in __pyx_f_5MACS2_2IO_23CallPeakUnitPrecompiled_28CallerFromPrecompiledPileups___chrom_call_broadpeak_using_certain_criteria()
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H A DCallPeakUnit.c20272 __pyx_t_5numpy_int32_t __pyx_v_lvl2_max_gap = ((__pyx_t_5numpy_int32_t)0x190); in __pyx_f_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_call_broadpeaks() local
20323 __pyx_v_lvl2_max_gap = __pyx_optional_args->lvl2_max_gap; in __pyx_f_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_call_broadpeaks()
20348 …__pyx_t_5 = __Pyx_PyInt_From_npy_int32(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_5)) __PYX_ERR(… in __pyx_f_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_call_broadpeaks()
20583 __pyx_t_12.max_gap = __pyx_v_lvl2_max_gap; in __pyx_f_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_call_broadpeaks()
21542 __pyx_t_5numpy_int32_t __pyx_v_lvl2_max_gap; in __pyx_pw_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_11call_broadpeaks() local
21648 …__pyx_v_lvl2_max_gap = __Pyx_PyInt_As_npy_int32(values[5]); if (unlikely((__pyx_v_lvl2_max_gap == … in __pyx_pw_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_11call_broadpeaks()
21650 __pyx_v_lvl2_max_gap = ((__pyx_t_5numpy_int32_t)0x190); in __pyx_pw_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_11call_broadpeaks()
21666 … __pyx_v_lvl2_cutoff_s, __pyx_v_min_length, __pyx_v_lvl1_max_gap, __pyx_v_lvl2_max_gap, __pyx_v_cu… in __pyx_pw_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_11call_broadpeaks()
21689 __pyx_t_2.lvl2_max_gap = __pyx_v_lvl2_max_gap; in __pyx_pf_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments_10call_broadpeaks()
23251 …__pyx_t_5 = __Pyx_PyInt_From_npy_int32(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_5)) __PYX_ERR(… in __pyx_f_5MACS2_2IO_12CallPeakUnit_20CallerFromAlignments___chrom_call_broadpeak_using_certain_criteria()
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H A DBedGraph.c2431 …vl2_cutoff, int __pyx_v_min_length, int __pyx_v_lvl1_max_gap, int __pyx_v_lvl2_max_gap); /* proto …
9096 int __pyx_v_lvl2_max_gap; in __pyx_pw_5MACS2_2IO_8BedGraph_14bedGraphTrackI_29call_broadpeaks() local
9192 …__pyx_v_lvl2_max_gap = __Pyx_PyInt_As_int(values[4]); if (unlikely((__pyx_v_lvl2_max_gap == (int)-… in __pyx_pw_5MACS2_2IO_8BedGraph_14bedGraphTrackI_29call_broadpeaks()
9194 __pyx_v_lvl2_max_gap = ((int)0x190); in __pyx_pw_5MACS2_2IO_8BedGraph_14bedGraphTrackI_29call_broadpeaks()
9205 …_lvl1_cutoff, __pyx_v_lvl2_cutoff, __pyx_v_min_length, __pyx_v_lvl1_max_gap, __pyx_v_lvl2_max_gap); in __pyx_pw_5MACS2_2IO_8BedGraph_14bedGraphTrackI_29call_broadpeaks()
9212 … __pyx_v_lvl2_cutoff, int __pyx_v_min_length, int __pyx_v_lvl1_max_gap, int __pyx_v_lvl2_max_gap) { in __pyx_pf_5MACS2_2IO_8BedGraph_14bedGraphTrackI_28call_broadpeaks() argument
9279 if (unlikely(!((__pyx_v_lvl1_max_gap < __pyx_v_lvl2_max_gap) != 0))) { in __pyx_pf_5MACS2_2IO_8BedGraph_14bedGraphTrackI_28call_broadpeaks()
9335 …__pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 525… in __pyx_pf_5MACS2_2IO_8BedGraph_14bedGraphTrackI_28call_broadpeaks()
H A DScoreTrack.c19943 __pyx_t_5numpy_int32_t __pyx_v_lvl2_max_gap = ((__pyx_t_5numpy_int32_t)0x190); in __pyx_f_5MACS2_2IO_10ScoreTrack_12scoreTrackII_call_broadpeaks() local
19996 __pyx_v_lvl2_max_gap = __pyx_optional_args->lvl2_max_gap; in __pyx_f_5MACS2_2IO_10ScoreTrack_12scoreTrackII_call_broadpeaks()
20024 …__pyx_t_7 = __Pyx_PyInt_From_npy_int32(__pyx_v_lvl2_max_gap); if (unlikely(!__pyx_t_7)) __PYX_ERR(… in __pyx_f_5MACS2_2IO_10ScoreTrack_12scoreTrackII_call_broadpeaks()
20134 if (unlikely(!((__pyx_v_lvl1_max_gap < __pyx_v_lvl2_max_gap) != 0))) { in __pyx_f_5MACS2_2IO_10ScoreTrack_12scoreTrackII_call_broadpeaks()
20167 __pyx_t_12.max_gap = __pyx_v_lvl2_max_gap; in __pyx_f_5MACS2_2IO_10ScoreTrack_12scoreTrackII_call_broadpeaks()
20869 __pyx_t_5numpy_int32_t __pyx_v_lvl2_max_gap; in __pyx_pw_5MACS2_2IO_10ScoreTrack_12scoreTrackII_27call_broadpeaks() local
20965 …__pyx_v_lvl2_max_gap = __Pyx_PyInt_As_npy_int32(values[4]); if (unlikely((__pyx_v_lvl2_max_gap == … in __pyx_pw_5MACS2_2IO_10ScoreTrack_12scoreTrackII_27call_broadpeaks()
20967 __pyx_v_lvl2_max_gap = ((__pyx_t_5numpy_int32_t)0x190); in __pyx_pw_5MACS2_2IO_10ScoreTrack_12scoreTrackII_27call_broadpeaks()
20978 …_lvl1_cutoff, __pyx_v_lvl2_cutoff, __pyx_v_min_length, __pyx_v_lvl1_max_gap, __pyx_v_lvl2_max_gap); in __pyx_pw_5MACS2_2IO_10ScoreTrack_12scoreTrackII_27call_broadpeaks()
20985 …length, __pyx_t_5numpy_int32_t __pyx_v_lvl1_max_gap, __pyx_t_5numpy_int32_t __pyx_v_lvl2_max_gap) { in __pyx_pf_5MACS2_2IO_10ScoreTrack_12scoreTrackII_26call_broadpeaks() argument
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