Searched refs:chimeric_goodness (Results 1 – 1 of 1) sorted by relevance
3118 int max_single_goodness, chimeric_goodness, penalty, matches0, matches1; in check_for_chimera() local3419 chimeric_goodness = Stage3_chimeric_goodness(&matches0,&matches1,from,to,chimerapos); in check_for_chimera()3420 debug2(printf("chimeric goodness = %d\n",chimeric_goodness)); in check_for_chimera()3428 if (chimeric_goodness < max_single_goodness + penalty) { in check_for_chimera()