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Searched refs:circularp_in (Results 1 – 12 of 12) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dextension-search.h50 Univcoord_T genomelength_in, int circular_typeint_in, bool *circularp_in,
H A Dpath-solve.h47 Path_solve_setup (Univcoord_T genomelength_in, bool *circularp_in,
H A Dconcordance.h61 bool *circularp_in, bool merge_samechr_p_in);
H A Dkmer-search.h67 int circular_typeint_in, bool *circularp_in,
H A Dstage3hr.h54 bool *circularp_in, bool *altlocp_in,
H A Dstage3.h55 Univcoord_T *splicesites_in, bool *circularp_in, bool *altlocp_in,
H A Dextension-search.c133 Univcoord_T genomelength_in, int circular_typeint_in, bool *circularp_in, in Extension_search_setup() argument
144 circularp = circularp_in; in Extension_search_setup()
H A Dconcordance.c1850 bool *circularp_in, bool merge_samechr_p_in) { in Concordance_setup() argument
1861 circularp = circularp_in; in Concordance_setup()
H A Dpath-solve.c4010 Path_solve_setup (Univcoord_T genomelength_in, bool *circularp_in, in Path_solve_setup() argument
4018 circularp = circularp_in; in Path_solve_setup()
H A Dkmer-search.c6856 int circular_typeint_in, bool *circularp_in, in Kmer_search_setup() argument
6869 circularp = circularp_in; in Kmer_search_setup()
H A Dstage3hr.c258 bool *circularp_in, bool *altlocp_in, in Stage3hr_setup() argument
316 circularp = circularp_in; in Stage3hr_setup()
H A Dstage3.c363 Univcoord_T *splicesites_in, bool *circularp_in, bool *altlocp_in, in Stage3_setup() argument
389 circularp = circularp_in; in Stage3_setup()