Searched refs:cs2hs (Results 1 – 3 of 3) sorted by relevance
99 ESL_ALLOC(cp9map->cs2hs, sizeof(int *) * (cp9map->cm_M+1)); in AllocCP9Map()103 ESL_ALLOC(cp9map->cs2hs[v], sizeof(int) * 2); in AllocCP9Map()105 cp9map->cs2hn[v][i] = cp9map->cs2hs[v][i] = -1; in AllocCP9Map()153 free(cp9map->cs2hs[v]); in FreeCP9Map()156 free(cp9map->cs2hs); in FreeCP9Map()655 if(v1 != -1 && (cp9map->cs2hn[v1][0] == k && cp9map->cs2hs[v1][0] == ks)) in CP9_map_cm2hmm()659 else if(v1 != -1 && (cp9map->cs2hn[v1][1] == k && cp9map->cs2hs[v1][1] == ks)) in CP9_map_cm2hmm()723 if(cp9map->cs2hs[v][0] != -1) in map_helper()725 cp9map->cs2hs[v][0] = ks; in map_helper()730 if(cp9map->cs2hs[v][1] != -1) in map_helper()[all …]
870 int **cs2hs; /* [0..cm_M][0..1], 1 or 2 HMM states (0=MATCH, 1=INSERT, 2=DELETE) member
1519 ks = cm->cp9map->cs2hs[v][i]; in Parsetree2CP9trace()