Searched refs:cutoff_level (Results 1 – 6 of 6) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | concordance.c | 350 cutoff_level = level; 717 int cutoff_level, level; in Concordance_pair_up_genome() local 779 cutoff_level = level; in Concordance_pair_up_genome() 782 cutoff_level = level; in Concordance_pair_up_genome() 785 cutoff_level = level; in Concordance_pair_up_genome() 1527 int cutoff_level, level; in Concordance_pair_up_distant() local 1585 cutoff_level = level; in Concordance_pair_up_distant() 1588 cutoff_level = level; in Concordance_pair_up_distant() 1591 cutoff_level = level; in Concordance_pair_up_distant() 1594 cutoff_level = level; in Concordance_pair_up_distant() [all …]
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H A D | dynprog_end.h | 95 int cutoff_level, char *queryptr, int querylength, Compress_T query_compress, 111 int cutoff_level, char *queryptr, int querylength, Compress_T query_compress,
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H A D | stage3hr.c | 6666 int cutoff_level, ref_nmismatches; in Stage3end_optimal_score_prefinal() local 6783 cutoff_level = minscore; in Stage3end_optimal_score_prefinal() 6791 hit->score_eventrim,cutoff_level)); in Stage3end_optimal_score_prefinal() 6798 hit->score_eventrim,cutoff_level)); in Stage3end_optimal_score_prefinal() 6917 int max_nmatches = 0, cutoff_level; 6949 cutoff_level = max_nmatches - subopt_levels; 6987 cutoff_level = max_nmatches - subopt_levels; 7262 int cutoff_level; in Stage3end_optimal_score_final() local 14297 int max_nmatches = 0, cutoff_level; 14339 cutoff_level = max_nmatches - subopt_levels; [all …]
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H A D | ladder.c | 783 cutoff_level = score; 785 cutoff_level = max_score; 788 return cutoff_level;
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/dports/biology/gmap/gmap-2020-09-12/ |
H A D | ChangeLog | 4157 subopt_levels into Stage3hr_setup. Removing cutoff_level as parameter 4483 turning off comparison of score_eventrim with cutoff_level. In 5949 being cutoff_level, and not querylength. Using reject_trimlength instead 11161 Stage3end_bad_stretch_p to Stage3end_score > cutoff_level, because 13422 * stage1hr.c: Fixed issues with fast_level and cutoff_level for very short
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/dports/security/amavisd-new/amavis-v2.12.0/ |
H A D | RELEASE_NOTES | 9507 spam above cutoff_level) did not turn LMTP status into a success,
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