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Searched refs:cv_y (Results 1 – 25 of 62) sorted by relevance

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/dports/math/stanmath/math-4.2.0/lib/sundials_5.7.0/src/cvodes/
H A Dcvodes_nls.c140 *yn = cv_mem->cv_y; in CVodeGetNonlinearSystemData()
213 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
246 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
313 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
316 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
342 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
345 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvodes_nls_sim.c291 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensSim()
332 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, in cvNlsLSolveSensSim()
344 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensSim()
451 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidualSensSim()
454 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
476 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
515 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunctionSensSim()
518 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
539 cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
H A Dcvodes_nls_stg1.c210 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg1()
250 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg1()
324 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg1()
359 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg1()
H A Dcvodes_nls_stg.c245 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg()
287 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg()
390 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg()
435 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg()
H A Dcvodes.c2800 if ((cv_mem->cv_y = yout) == NULL) { in CVode()
5173 retval = cv_mem->cv_f(cv_mem->cv_tn+hg, cv_mem->cv_y, in cvYddNorm()
5201 cv_mem->cv_y, cv_mem->cv_yS, in cvYddNorm()
6364 retval = cv_mem->cv_fQ(cv_mem->cv_tn, cv_mem->cv_y, in cvQuadNls()
7690 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck1()
7759 N_VLinearSum(ONE, cv_mem->cv_y, hratio, cv_mem->cv_zn[1], cv_mem->cv_y); in cvRcheck2()
7761 (void) CVodeGetDky(cv_mem, tplus, 0, cv_mem->cv_y); in cvRcheck2()
7763 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck2()
7806 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
7811 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
[all …]
/dports/math/sundials/sundials-5.7.0/src/cvodes/
H A Dcvodes_nls.c140 *yn = cv_mem->cv_y; in CVodeGetNonlinearSystemData()
213 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
246 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
313 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
316 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
342 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
345 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvodes_nls_sim.c291 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensSim()
332 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, in cvNlsLSolveSensSim()
344 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensSim()
451 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidualSensSim()
454 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
476 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
515 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunctionSensSim()
518 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
539 cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
H A Dcvodes_nls_stg1.c210 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg1()
250 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg1()
324 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg1()
359 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg1()
H A Dcvodes_nls_stg.c245 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg()
287 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg()
390 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg()
435 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg()
/dports/math/sundials/sundials-5.7.0/src/cvode/
H A Dcvode_nls.c157 *yn = cv_mem->cv_y; in CVodeGetNonlinearSystemData()
230 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
261 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
327 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
330 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
365 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
368 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvode.c1036 if ((cv_mem->cv_y = yout) == NULL) { in CVode()
2065 retval = cv_mem->cv_f(cv_mem->cv_tn+hg, cv_mem->cv_y, in cvYddNorm()
2820 cv_mem->cv_y, in cvCheckConstraints()
3807 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck1()
3853 retval = cv_mem->cv_gfun(cv_mem->cv_tlo, cv_mem->cv_y, in cvRcheck2()
3876 N_VLinearSum(ONE, cv_mem->cv_y, hratio, cv_mem->cv_zn[1], cv_mem->cv_y); in cvRcheck2()
3878 (void) CVodeGetDky(cv_mem, tplus, 0, cv_mem->cv_y); in cvRcheck2()
3880 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck2()
3923 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
3928 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
[all …]
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/ext/sundials/src/cvodes/
H A Dcvodes_nls_sim.c258 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensSim()
299 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, in cvNlsLSolveSensSim()
311 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensSim()
418 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidualSensSim()
421 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
443 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
482 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunctionSensSim()
485 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
506 cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
H A Dcvodes_nls.c178 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
211 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
278 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
281 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
307 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
310 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvodes_nls_stg1.c210 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg1()
250 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg1()
324 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg1()
359 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg1()
H A Dcvodes_nls_stg.c245 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg()
287 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg()
390 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg()
435 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg()
H A Dcvodes.c2800 if ((cv_mem->cv_y = yout) == NULL) { in CVode()
5101 retval = cv_mem->cv_f(cv_mem->cv_tn+hg, cv_mem->cv_y, in cvYddNorm()
5129 cv_mem->cv_y, cv_mem->cv_yS, in cvYddNorm()
6276 retval = cv_mem->cv_fQ(cv_mem->cv_tn, cv_mem->cv_y, in cvQuadNls()
7595 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck1()
7664 N_VLinearSum(ONE, cv_mem->cv_y, hratio, cv_mem->cv_zn[1], cv_mem->cv_y); in cvRcheck2()
7666 (void) CVodeGetDky(cv_mem, tplus, 0, cv_mem->cv_y); in cvRcheck2()
7668 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck2()
7711 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
7716 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
[all …]
/dports/math/py-pystan/pystan-2.19.0.0/pystan/stan/lib/stan_math/lib/sundials_4.1.0/src/cvodes/
H A Dcvodes_nls_sim.c259 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensSim()
300 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, in cvNlsLSolveSensSim()
312 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensSim()
418 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidualSensSim()
421 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
443 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensSim()
482 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunctionSensSim()
485 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
506 cv_mem->cv_y, res, in cvNlsFPFunctionSensSim()
H A Dcvodes_nls.c178 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
211 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
277 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
280 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
306 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
309 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvodes_nls_stg1.c211 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg1()
251 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg1()
325 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg1()
360 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg1()
H A Dcvodes_nls_stg.c246 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, in cvNlsLSetupSensStg()
288 cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolveSensStg()
389 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidualSensStg()
434 cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsFPFunctionSensStg()
H A Dcvodes.c2766 if ((cv_mem->cv_y = yout) == NULL) { in CVode()
4833 retval = cv_mem->cv_f(cv_mem->cv_tn+hg, cv_mem->cv_y, in cvYddNorm()
6487 N_VLinearSum(ONE, cv_mem->cv_y, -PT1, in cvCheckConstraints()
6534 retval = cv_mem->cv_fQ(cv_mem->cv_tn, cv_mem->cv_y, in cvQuadNls()
7837 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck1()
7907 N_VLinearSum(ONE, cv_mem->cv_y, hratio, cv_mem->cv_zn[1], cv_mem->cv_y); in cvRcheck2()
7909 (void) CVodeGetDky(cv_mem, tplus, 0, cv_mem->cv_y); in cvRcheck2()
7911 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck2()
7954 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
7959 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
[all …]
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/ext/sundials/src/cvode/
H A Dcvode_nls.c196 retval = cv_mem->cv_lsetup(cv_mem, cv_mem->convfail, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsLSetup()
227 retval = cv_mem->cv_lsolve(cv_mem, delta, cv_mem->cv_ewt, cv_mem->cv_y, cv_mem->cv_ftemp); in cvNlsLSolve()
293 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsResidual()
296 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, cv_mem->cv_ftemp, in cvNlsResidual()
331 N_VLinearSum(ONE, cv_mem->cv_zn[0], ONE, ycor, cv_mem->cv_y); in cvNlsFPFunction()
334 retval = cv_mem->cv_f(cv_mem->cv_tn, cv_mem->cv_y, res, in cvNlsFPFunction()
H A Dcvode.c1036 if ((cv_mem->cv_y = yout) == NULL) { in CVode()
2042 retval = cv_mem->cv_f(cv_mem->cv_tn+hg, cv_mem->cv_y, in cvYddNorm()
2791 cv_mem->cv_y, in cvCheckConstraints()
3778 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck1()
3824 retval = cv_mem->cv_gfun(cv_mem->cv_tlo, cv_mem->cv_y, in cvRcheck2()
3847 N_VLinearSum(ONE, cv_mem->cv_y, hratio, cv_mem->cv_zn[1], cv_mem->cv_y); in cvRcheck2()
3849 (void) CVodeGetDky(cv_mem, tplus, 0, cv_mem->cv_y); in cvRcheck2()
3851 retval = cv_mem->cv_gfun(tplus, cv_mem->cv_y, in cvRcheck2()
3894 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
3899 N_VScale(ONE, cv_mem->cv_zn[0], cv_mem->cv_y); in cvRcheck3()
[all …]
/dports/science/plumed/plumed2-2.7.2/user-doc/tutorials/others/opes-metad/
H A DFES_from_Reweighting.py202 cv_y=np.array(data.iloc[:,all_cols.index(col_y)]) variable
243 grid_min_y=min(cv_y)
253 grid_max_y=max(cv_y)
379 dist_y=(point_y-cv_y[start:end])/sigma_y
381 dy=np.absolute(point_y-cv_y[start:end])
/dports/math/casadi/casadi-3.5.5/external_packages/casadi-sundials/cvodes/
H A Dcvodes_impl.h178 N_Vector cv_y; /* y is used as temporary storage by the solver. member
637 N_Vector cv_y; member

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