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Searched refs:eSumAlpha_ (Results 1 – 9 of 9) sorted by relevance

/dports/biology/diamond/diamond-2.0.13/src/lib/alp/
H A Dnjn_localmaxstatutil.cpp354 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpochRepeat() argument
419 if (eSumAlpha_) *eSumAlpha_ = 0.0; in descendingLadderEpochRepeat()
438 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
462 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
482 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpoch() argument
494 eSumAlpha_, eOneMinusExpSumAlpha_, isStrict_, 0.0, 0, 0, 0, in descendingLadderEpoch()
H A Dnjn_localmaxstat.cpp201 double eSumAlpha_ = 0.0; in dynProgCalc() local
204 &eSumAlpha_, &eOneMinusExpSumAlpha_, false, in dynProgCalc()
210 double ratio = eOneMinusExpSumAlpha_ / eSumAlpha_; in dynProgCalc()
212 d_meanWDLE = eSumAlpha_ / getMu (); in dynProgCalc()
H A Dnjn_localmaxstatutil.hpp122 double *eSumAlpha_ = 0, // expectation (sum [alpha])
137 double *eSumAlpha_ = 0, // expectation (sum [alpha])
/dports/biology/mmseqs2/MMseqs2-13-45111/lib/alp/
H A Dnjn_localmaxstatutil.cpp354 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpochRepeat() argument
419 if (eSumAlpha_) *eSumAlpha_ = 0.0; in descendingLadderEpochRepeat()
438 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
462 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
482 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpoch() argument
494 eSumAlpha_, eOneMinusExpSumAlpha_, isStrict_, 0.0, 0, 0, 0, in descendingLadderEpoch()
H A Dnjn_localmaxstat.cpp201 double eSumAlpha_ = 0.0; in dynProgCalc() local
204 &eSumAlpha_, &eOneMinusExpSumAlpha_, false, in dynProgCalc()
210 double ratio = eOneMinusExpSumAlpha_ / eSumAlpha_; in dynProgCalc()
212 d_meanWDLE = eSumAlpha_ / getMu (); in dynProgCalc()
H A Dnjn_localmaxstatutil.hpp122 double *eSumAlpha_ = 0, // expectation (sum [alpha])
137 double *eSumAlpha_ = 0, // expectation (sum [alpha])
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/gumbel_params/
H A Dnjn_localmaxstatutil.cpp370 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpochRepeat() argument
439 if (eSumAlpha_) *eSumAlpha_ = 0.0; in descendingLadderEpochRepeat()
458 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
482 if (eSumAlpha_) *eSumAlpha_ += dynProgProb.getProb (value) * static_cast <double> (value); in descendingLadderEpochRepeat()
504 double *eSumAlpha_, // expectation (sum [alpha]) in descendingLadderEpoch() argument
516 eSumAlpha_, eOneMinusExpSumAlpha_, isStrict_, 0.0, 0, 0, 0, in descendingLadderEpoch()
H A Dnjn_localmaxstat.cpp205 double eSumAlpha_ = 0.0; in dynProgCalc() local
208 &eSumAlpha_, &eOneMinusExpSumAlpha_, false, in dynProgCalc()
214 double ratio = eOneMinusExpSumAlpha_ / eSumAlpha_; in dynProgCalc()
216 d_meanWDLE = eSumAlpha_ / getMu (); in dynProgCalc()
H A Dnjn_localmaxstatutil.hpp129 double *eSumAlpha_ = 0, // expectation (sum [alpha])
144 double *eSumAlpha_ = 0, // expectation (sum [alpha])