Searched refs:failsonlyp (Results 1 – 6 of 6) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | output.c | 28 static bool failsonlyp; variable 96 failsonlyp = failsonlyp_in; in Output_setup() 197 if (failsonlyp == true) { in filestring_fromresult_sam() 242 if (failsonlyp == true) { in filestring_fromresult_sam() 297 if (failsonlyp == true) { in filestring_fromresult_sam() 436 if (failsonlyp == true) { in filestring_fromresult_gsnap() 468 if (failsonlyp == true) { in filestring_fromresult_gsnap() 506 if (failsonlyp == true) { in filestring_fromresult_gsnap() 580 if (failsonlyp == true) { in filestring_fromresult_gsnap() 714 if (failsonlyp == true) { in Output_filestring_fromresult() [all …]
|
H A D | samprint.h | 63 bool nofailsp, bool failsonlyp, int quality_shift, char *sam_read_group_id);
|
H A D | gsnap.c | 471 static bool failsonlyp = false; variable 2216 failsonlyp = true; in parse_command_line() 2219 if (failsonlyp == true) { in parse_command_line() 3529 Output_setup(chromosome_iit,nofailsp,failsonlyp,quiet_if_excessive_p,maxpaths_report, in worker_setup()
|
H A D | samprint.c | 1425 bool nofailsp, bool failsonlyp, int quality_shift, char *sam_read_group_id) { in SAM_print_paired() argument 1477 if (failsonlyp == true) { in SAM_print_paired()
|
H A D | sam_sort.c | 372 } else if (failsonlyp == true && this->split_output != OUTPUT_NM && in Cell_print_fromfile()
|
H A D | gmap.c | 437 static bool failsonlyp = false; variable 5873 failsonlyp = true; in parse_command_line() 5882 if (failsonlyp == true) { in parse_command_line() 7037 Output_setup(chromosome_iit,nofailsp,failsonlyp,quiet_if_excessive_p,maxpaths_report, in main()
|