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Searched refs:freqr (Results 1 – 25 of 28) sorted by relevance

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/dports/science/nwchem-data/nwchem-7.0.2-release/src/drdy/
H A Dsumout.F28 write (fu6,611) sr,(freqr(i,1),i=1,ntot)
34 write (fu6,613) sp,(freqr(i,3),i=1,ntot)
38 * (freqr(i,5),i=1,nfreq+1)
H A Drestor.F88 freqr(ifreq,iop) = scr2(ifreq)
93 freqr(ifreq+nfreq1,iop-1) = scr2(ifreq)
147 freqr(i,5) = scr2(i)
H A Dreact2.F55 freqr(ifreq,iop) = scr2(ifreq)
60 freqr(ifreq+nfreq1,iop-1) = scr2(ifreq)
H A DdrdyP.fh35 Double Precision xr(n3tm,5),freqr(n3tm,5)
51 Common /geocm/ xr,freqr
H A Dsaddle.F67 freqr(i,5) = scr2(i)
/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/drdy/
H A Dsumout.F28 write (fu6,611) sr,(freqr(i,1),i=1,ntot)
34 write (fu6,613) sp,(freqr(i,3),i=1,ntot)
38 * (freqr(i,5),i=1,nfreq+1)
H A Drestor.F88 freqr(ifreq,iop) = scr2(ifreq)
93 freqr(ifreq+nfreq1,iop-1) = scr2(ifreq)
147 freqr(i,5) = scr2(i)
H A Dreact2.F55 freqr(ifreq,iop) = scr2(ifreq)
60 freqr(ifreq+nfreq1,iop-1) = scr2(ifreq)
H A DdrdyP.fh35 Double Precision xr(n3tm,5),freqr(n3tm,5)
51 Common /geocm/ xr,freqr
H A Dsaddle.F67 freqr(i,5) = scr2(i)
/dports/math/scilab/scilab-6.1.1/scilab/modules/cacsd/src/fortran/
H A Ddfrmg.f1 subroutine dfrmg(job,na,nb,nc,l,m,n,a,b,c,freqr,freqi, argument
4 double precision a(na,n),b(nb,m),c(nc,n),freqr,freqi
157 w(j1+j-1)=w(j1+j-1)-freqr
/dports/biology/fluctuate/fluctuate1.4/
H A Dgetdata.c324 dna->freqr = dna->freqa + dna->freqg; in getbasefreqs()
326 dna->freqar = dna->freqa / dna->freqr; in getbasefreqs()
328 dna->freqgr = dna->freqg / dna->freqr; in getbasefreqs()
331 aa = locus_ttratio * dna->freqr * dna->freqy - in getbasefreqs()
H A Dfluctuate.h283 double freqa, freqc, freqg, freqt, freqr, freqy, freqar, freqcy, member
/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/phylip/src/
H A Ddnadist.h22 extern double xi, xv, ttratio, ttratio0, freqa, freqc, freqg, freqt, freqr, freqy,
H A Dprotdist.cpp519 double aa, bb, freqr, freqy, freqgr, freqty; in transition() local
521 freqr = freqa + freqg; in transition()
523 freqgr = freqg / freqr; in transition()
525 aa = ttratio * freqr * freqy - freqa * freqg - freqc * freqt; in transition()
H A Ddnadist.cpp65 double xi, xv, ttratio, ttratio0, freqa, freqc, freqg, freqt, freqr, freqy, variable
889 getbasefreqs(freqa, freqc, freqg, freqt, &freqr, &freqy, &freqar, &freqcy, in getinput()
923 getbasefreqs(freqa, freqc, freqg, freqt, &freqr, &freqy, &freqar, &freqcy, in getinput()
H A DDistanceMatrix.cpp102 …getbasefreqs(freqa, freqc, freqg, freqt, &freqr, &freqy, &freqar, &freqcy, &freqgr, &freqty, &ttra… in calculateOutOfAlignment()
/dports/math/py-statsmodels/statsmodels-0.13.1/statsmodels/distributions/
H A Dtools.py250 freqr, _ = np.histogramdd(data, bins=g2.x_marginal)
251 return freqr
/dports/biology/fastdnaml/fastDNAml_1.2.2/source/
H A DfastDNAml.h112 freqr, freqy, invfreqr, invfreqy, member
/dports/biology/recombine/recombine1.41/
H A Dgetdata.c1195 dna->freqr = dna->freqa + dna->freqg; in getbasednafreqs()
1197 dna->freqar = dna->freqa / dna->freqr; in getbasednafreqs()
1199 dna->freqgr = dna->freqg / dna->freqr; in getbasednafreqs()
1202 aa = locus_ttratio * dna->freqr * dna->freqy - in getbasednafreqs()
H A Drecombine.h385 double freqa, freqc, freqg, freqt, freqr, freqy, freqar, freqcy, member
/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/DALTON/cc/
H A Dccexnorm.F568 real tcon, sixth, freql, freqr, xcon(3)
572 double precision tcon, sixth, freql, freqr, xcon(3)
913 call ccsdt_tbar31_noddy(work(kr3am),freqr,listr,iright,
937 & freqr,.false.,
958 call ccsdt_t32_noddy(work(kr3am),listr,iright,freqr,
/dports/biology/migrate/migrate-3.6.11/src/
H A Dsequence.c407 register MYREAL freqa, freqc, freqg, freqt, freqr, freqy; in getbasefreqs() local
439 freqr = seq->basefrequencies[NUC_R]; in getbasefreqs()
441 seq->basefrequencies[NUC_AR]= freqa / freqr; in getbasefreqs()
443 seq->basefrequencies[NUC_GR]= freqg / freqr; in getbasefreqs()
451 seq->ttratio * (freqr) * (freqy) - freqa * freqg - in getbasefreqs()
464 freqc * freqt) / ((freqr) * (freqy)); in getbasefreqs()
/dports/biology/seaview/seaview/csrc/
H A Dseq.c373 double *freqr, double *freqy, double *freqar, double *freqcy, in getbasefreqs() argument
392 *freqr = freqa + freqg; in getbasefreqs()
394 *freqar = freqa / *freqr; in getbasefreqs()
396 *freqgr = freqg / *freqr; in getbasefreqs()
398 aa = *ttratio * (*freqr) * (*freqy) - freqa * freqg - freqc * freqt; in getbasefreqs()
407 (*ttratio) = (freqa*freqg+freqc*freqt)/((*freqr)*(*freqy)); in getbasefreqs()
/dports/math/libpgmath/flang-d07daf3/test/ncar_kernels/CAM5_mg2_pgi/src/
H A Dmicro_mg2_0.F90234 …drout2, dsout2, freqs, freqr, nfice, qcrat, errstring, tnd_qsnow, tnd_nsnow, re_ice, prer_evap, fr… argument
378 REAL(KIND=r8), intent(out) :: freqr(:,:) ! fractional occurrence of rain local
763 freqr = 0._r8
2011 freqr = precip_frac
2017 freqr = 0._r8

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