Searched refs:gsubseq (Results 1 – 4 of 4) sorted by relevance
1651 const char* gsubseq=faseq->subseq(start, fspan); in getUnspliced() local1652 if (gsubseq==NULL) { in getUnspliced()1684 unspliced[s]=gsubseq[i-start]; in getUnspliced()1704 const char* gsubseq=faseq->subseq(start, fspan); in getSpliced() local1705 if (gsubseq==NULL) { in getSpliced()1752 spliced[s] = ntComplement(gsubseq[i-start]); in getSpliced()1782 spliced[s]=gsubseq[i-start]; in getSpliced()1810 const char* gsubseq=faseq->subseq(start, fspan); in getSplicedTr() local1811 if (gsubseq==NULL) { in getSplicedTr()1846 codon.nuc[nt]=ntComplement(gsubseq[i-start]); in getSplicedTr()[all …]
2551 const char* gsubseq=faseq->subseq(start, fspan); in getUnspliced() local2552 if (gsubseq==NULL) { in getUnspliced()2573 unspliced[s] = ntComplement(gsubseq[i-start]); in getUnspliced()2582 unspliced[s]=gsubseq[i-start]; in getUnspliced()2629 const char* gsubseq=faseq->subseq(start, fspan); in getSpliced() local2630 if (gsubseq==NULL) { in getSpliced()2690 spliced[s] = ntComplement(gsubseq[i-start]); in getSpliced()2720 spliced[s]=gsubseq[i-start]; in getSpliced()
2583 const char* gsubseq=faseq->subseq(start, fspan); in getUnspliced() local2584 if (gsubseq==NULL) { in getUnspliced()2605 unspliced[s] = ntComplement(gsubseq[i-start]); in getUnspliced()2614 unspliced[s]=gsubseq[i-start]; in getUnspliced()2661 const char* gsubseq=faseq->subseq(start, fspan); in getSpliced() local2662 if (gsubseq==NULL) { in getSpliced()2722 spliced[s] = ntComplement(gsubseq[i-start]); in getSpliced()2752 spliced[s]=gsubseq[i-start]; in getSpliced()