| /dports/biology/vt/vt-0.57721/lib/htslib/ |
| H A D | htsfile.c | 65 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
239 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| H A D | hts.c | 426 fp = hts_hopen(hfile, fn, smode); in hts_open_format()
783 htsFile *hts_hopen(hFILE *hfile, const char *fn, const char *mode) in hts_hopen() function
|
| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/ |
| H A D | htsfile.c | 65 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
239 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| H A D | hts.c | 426 fp = hts_hopen(hfile, fn, smode); in hts_open_format_impl()
798 htsFile *hts_hopen(hFILE *hfile, const char *fn, const char *mode) in hts_hopen() function
|
| /dports/biology/stacks/stacks-2.4/htslib/ |
| H A D | htsfile.c | 65 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
239 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| H A D | hts.c | 426 fp = hts_hopen(hfile, fn, smode); in hts_open_format()
775 htsFile *hts_hopen(hFILE *hfile, const char *fn, const char *mode) in hts_hopen() function
|
| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/ |
| H A D | htsfile.c | 65 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
239 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| H A D | hts.c | 424 fp = hts_hopen(hfile, fn, smode); in hts_open_format()
770 htsFile *hts_hopen(hFILE *hfile, const char *fn, const char *mode) in hts_hopen() function
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/ |
| H A D | htsfile.c | 69 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
297 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
| H A D | htsfile.c | 69 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
297 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| /dports/biology/htslib/htslib-1.14/ |
| H A D | htsfile.c | 69 return hfp? hts_hopen(hfp, "-", mode) : NULL; in dup_stdout()
297 htsFile *hts = hts_hopen(fp, argv[i], "r"); in main()
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/test/fuzz/ |
| H A D | hts_open_fuzzer.c | 133 htsFile *ht_file = hts_hopen(memfile, "data", "rb"); in LLVMFuzzerTestOneInput()
|
| /dports/biology/htslib/htslib-1.14/test/fuzz/ |
| H A D | hts_open_fuzzer.c | 133 htsFile *ht_file = hts_hopen(memfile, "data", "rb"); in LLVMFuzzerTestOneInput()
|
| /dports/biology/py-pysam/pysam-0.18.0/samtools/ |
| H A D | bam_reheader.c | 467 samFile* tmp_sf = hts_hopen(tmp_hf, tmp_fn, "w"); in external_reheader()
500 samFile* nh_sf = hts_hopen(nh_hf, tmp_fn, "r"); in external_reheader()
|
| H A D | bam_reheader.c.pysam.c | 469 samFile* tmp_sf = hts_hopen(tmp_hf, tmp_fn, "w"); in external_reheader()
502 samFile* nh_sf = hts_hopen(nh_hf, tmp_fn, "r"); in external_reheader()
|
| /dports/biology/samtools/samtools-1.14/ |
| H A D | bam_reheader.c | 467 samFile* tmp_sf = hts_hopen(tmp_hf, tmp_fn, "w"); in external_reheader()
500 samFile* nh_sf = hts_hopen(nh_hf, tmp_fn, "r"); in external_reheader()
|
| /dports/biology/plink/plink-ng-79b2df8c/1.9/ |
| H A D | hts.h | 244 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/ |
| H A D | hts.h | 393 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/vt/vt-0.57721/lib/htslib/htslib/ |
| H A D | hts.h | 396 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/ |
| H A D | hts.h | 408 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/stacks/stacks-2.4/htslib/htslib/ |
| H A D | hts.h | 394 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
| H A D | hts.h | 510 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
| H A D | hts.h | 607 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/htslib/htslib-1.14/htslib/ |
| H A D | hts.h | 607 htsFile *hts_hopen(struct hFILE *fp, const char *fn, const char *mode);
|
| /dports/biology/py-pysam/pysam-0.18.0/pysam/ |
| H A D | libchtslib.pyx | 566 htsfile = hts_hopen(hfile, cfilename, cmode)
|