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Searched refs:i2_psi (Results 1 – 1 of 1) sorted by relevance

/dports/biology/infernal/infernal-1.1.3/src/
H A Dcm_trunc.c62 float m_psi, i1_psi, i2_psi; /* temp psi values */ in cm_tr_penalties_Create() local
314 i2_psi = (i2 == -1) ? 0. : psi[i2]; in cm_tr_penalties_Create()
315 summed_psi = m_psi + i1_psi + i2_psi; in cm_tr_penalties_Create()
317 i1_psi = i2_psi = 0.; in cm_tr_penalties_Create()
329 if(i2 != -1) trp->g_ptyAA[TRPENALTY_5P_AND_3P][i2] = (i2_psi / summed_psi) * g_5and3; in cm_tr_penalties_Create()
335 if(i2 != -1) trp->g_ptyAA[TRPENALTY_5P_ONLY][i2] = (i2_psi / summed_psi) * g_5or3; in cm_tr_penalties_Create()
340 if(i2 != -1) trp->g_ptyAA[TRPENALTY_3P_ONLY][i2] = (i2_psi / summed_psi) * g_5or3; in cm_tr_penalties_Create()
365 if(i2 != -1) trp->l_ptyAA[TRPENALTY_5P_AND_3P][i2] = (i2_psi / summed_psi) * cur53; in cm_tr_penalties_Create()
369 if(i2 != -1) trp->l_ptyAA[TRPENALTY_5P_ONLY][i2] = (i2_psi / summed_psi) * cur5; in cm_tr_penalties_Create()
373 if(i2 != -1) trp->l_ptyAA[TRPENALTY_3P_ONLY][i2] = (i2_psi / summed_psi) * cur3; in cm_tr_penalties_Create()