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Searched refs:is_gff3 (Results 1 – 8 of 8) sorted by relevance

/dports/biology/stringtie/stringtie-2.1.1/gclib/
H A Dgff.cpp512 if (reader->is_gff3 || reader->gff_type==0) in GffLine()
520 if (reader->is_gff3 || reader->gff_type==0) { in GffLine()
524 if (ID!=NULL || Parent!=NULL) reader->is_gff3=true; in GffLine()
536 if (reader->is_gff3) { in GffLine()
1190 if (gfrd.is_gff3 && gfrd.showWarnings()) in GffObj()
1226 if (gfrd.is_gff3) { in GffObj()
1256 if (gfrd.is_gff3 && gffline.parents==NULL && gffline.exontype!=exgffNone) { in GffObj()
1435 if (this->transcripts_Only && this->is_gff3 && gffline->ID!=NULL && in newGffRec()
H A Dgff.h1149 bool is_gff3: 1; //GFF3 syntax was detected member
/dports/biology/libgff/libgff-2.0.0/src/
H A Dgff.cpp512 if (reader->is_gff3 || reader->gff_type==0) in GffLine()
520 if (reader->is_gff3 || reader->gff_type==0) { in GffLine()
524 if (ID!=NULL || Parent!=NULL) reader->is_gff3=true; in GffLine()
536 if (reader->is_gff3) { in GffLine()
1190 if (gfrd.is_gff3 && gfrd.showWarnings()) in GffObj()
1226 if (gfrd.is_gff3) { in GffObj()
1256 if (gfrd.is_gff3 && gffline.parents==NULL && gffline.exontype!=exgffNone) { in GffObj()
1435 if (this->transcripts_Only && this->is_gff3 && gffline->ID!=NULL && in newGffRec()
/dports/biology/gffread/gffread-0.12.7/gclib/
H A Dgff.cpp545 if (reader->is_gff3 || reader->gff_type==0) in GffLine()
553 if (reader->is_gff3 || reader->gff_type==0) { in GffLine()
564 if (ID!=NULL || Parent!=NULL) reader->is_gff3=true; in GffLine()
584 if (reader->is_gff3) { in GffLine()
1206 if (gfrd.is_gff3 && gfrd.showWarnings()) in GffObj()
1242 if (gfrd.is_gff3) { in GffObj()
1272 if (gfrd.is_gff3 && gffline.parents==NULL && gffline.exontype!=exgffNone) { in GffObj()
1452 if (this->transcripts_Only && this->is_gff3 && gffline->ID!=NULL && in newGffRec()
H A Dgff.h1166 bool is_gff3: 1; //GFF3 syntax was detected member
/dports/biology/cufflinks/cufflinks-2.2.1-89-gdc3b0cb/src/
H A Dgff.cpp249 is_gff3=(ID!=NULL || Parent!=NULL); in GffLine()
250 if (is_gff3) { in GffLine()
386 if (is_gff3) { in GffLine()
811 if (gffline->is_gff3 && gffline->exontype!=0) { in GffObj()
H A Dgff.h97 bool is_gff3:1; //if the line appears to be in GFF3 format member
/dports/biology/libgff/libgff-2.0.0/include/
H A Dgff.h1149 bool is_gff3: 1; //GFF3 syntax was detected member