| /dports/cad/horizon-eda/horizon-2.1.0/src/core/tools/ |
| H A D | tool_edit_line_rectangle.cpp | 28 junctions[0]->position = p0; in update_junctions()
29 junctions[1]->position = {p0.x, p1.y}; in update_junctions()
30 junctions[2]->position = p1; in update_junctions()
31 junctions[3]->position = {p1.x, p0.y}; in update_junctions()
77 junctions_found.erase(junctions[0]); in begin()
80 auto ju_prev = junctions[i - 1]; in begin()
81 junctions[i] = nullptr; in begin()
84 junctions[i] = li->to; in begin()
88 junctions[i] = li->from; in begin()
92 if (junctions[i]) { in begin()
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| H A D | tool_draw_line_circle.cpp | 25 junctions.at(0)->position = second_pos; in update_junctions()
26 junctions.at(1)->position = first_pos; in update_junctions()
27 junctions.at(2)->position = first_pos - (second_pos - first_pos); in update_junctions()
33 for (auto &it : junctions) { in create()
38 it->center = junctions.at(1); in create()
41 arcs.at(0)->from = junctions.at(0); in create()
42 arcs.at(0)->to = junctions.at(2); in create()
43 arcs.at(1)->from = junctions.at(2); in create()
44 arcs.at(1)->to = junctions.at(0); in create()
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| H A D | tool_draw_line_rectangle.cpp | 46 junctions[0]->position = p0; in update_junctions()
47 junctions[1]->position = {p0.x, p1.y}; in update_junctions()
48 junctions[2]->position = p1; in update_junctions()
49 junctions[3]->position = {p1.x, p0.y}; in update_junctions()
57 junctions[i] = doc.r->insert_junction(UUID::random()); in begin()
58 sf.emplace(ObjectType::JUNCTION, junctions[i]->uuid); in begin()
66 line->from = junctions[i]; in begin()
67 line->to = junctions[(i + 1) % 4]; in begin()
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| H A D | tool_draw_track.cpp | 39 temp_junc = &doc.b->get_board()->junctions.emplace(uu, uu).first->second; in create_temp_track()
63 auto &ju = brd.junctions.at(args.target.path.at(0)); in update()
74 brd.junctions.erase(temp_junc->uuid); in update()
90 brd.junctions.erase(temp_junc->uuid); in update()
122 auto &ju = brd.junctions.at(args.target.path.at(0)); in update()
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| /dports/biology/gmap/gmap-2020-09-12/src/ |
| H A D | path-solve.c | 148 List_T junctions; member
189 new->junctions = Junction_copy_list(old->junctions,listpool); in Path_copy_5()
218 new->junctions = Junction_copy_list(old->junctions,listpool); in Path_copy_3()
658 newpath->junctions = Listpool_push(newpath->junctions,listpool, in attach_qstart_diagonal()
664 newpath->junctions = Listpool_push(newpath->junctions,listpool, in attach_qstart_diagonal()
674 newpath->junctions = Listpool_push(newpath->junctions,listpool, in attach_qstart_diagonal()
681 newpath->junctions = Listpool_push(newpath->junctions,listpool, in attach_qstart_diagonal()
1652 newpath->junctions = Listpool_push(newpath->junctions,listpool, in attach_qend_diagonal()
2726 junctions = Listpool_pop(junctions,&void_ignore); in solve_via_segments_genome()
2966 junctions = List_append(Listpool_copy(qstart_path->junctions,listpool),junctions); in solve_via_segments_genome()
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| /dports/cad/horizon-eda/horizon-2.1.0/src/gen-pkg/ |
| H A D | gen-pkg.cpp | 99 std::array<Junction *, 4> junctions; in make_silkscreen_box() local
102 junctions[i] = &pkg.junctions.emplace(uu, uu).first->second; in make_silkscreen_box()
112 line.from = junctions.at(i); in make_silkscreen_box()
113 line.to = junctions.at(j); in make_silkscreen_box()
121 std::array<Junction *, 3> junctions; in make_silkscreen_arrow() local
124 junctions[i] = &pkg.junctions.emplace(uu, uu).first->second; in make_silkscreen_arrow()
135 line.from = junctions.at(i); in make_silkscreen_arrow()
136 line.to = junctions.at(j); in make_silkscreen_arrow()
285 junctions[i] = &pkg.junctions.emplace(uu, uu).first->second; in make_package_idc_254_vertical()
300 line.from = junctions.at(i); in make_package_idc_254_vertical()
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| /dports/cad/horizon-eda/horizon-2.1.0/src/frame/ |
| H A D | frame.cpp | 27 junctions.emplace(std::make_pair(u, Junction(u, it.value()))); in Frame()
73 return junctions.count(uu) ? &junctions.at(uu) : nullptr; in get_junction()
80 line.to = &junctions.at(line.to.uuid); in update_refs()
81 line.from = &junctions.at(line.from.uuid); in update_refs()
85 arc.to = &junctions.at(arc.to.uuid); in update_refs()
86 arc.from = &junctions.at(arc.from.uuid); in update_refs()
87 arc.center = &junctions.at(arc.center.uuid); in update_refs()
92 …: uuid(fr.uuid), name(fr.name), junctions(fr.junctions), lines(fr.lines), arcs(fr.arcs), texts(fr.… in Frame()
102 junctions = fr.junctions; in operator =()
137 for (const auto &it : junctions) { in serialize()
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| /dports/cad/horizon-eda/horizon-2.1.0/src/pool/ |
| H A D | decal.cpp | 25 junctions.emplace(std::make_pair(u, Junction(u, it.value()))); in Decal()
71 return junctions.count(uu) ? &junctions.at(uu) : nullptr; in get_junction()
78 line.to = &junctions.at(line.to.uuid); in update_refs()
79 line.from = &junctions.at(line.from.uuid); in update_refs()
83 arc.to = &junctions.at(arc.to.uuid); in update_refs()
84 arc.from = &junctions.at(arc.from.uuid); in update_refs()
85 arc.center = &junctions.at(arc.center.uuid); in update_refs()
90 …: uuid(fr.uuid), name(fr.name), junctions(fr.junctions), polygons(fr.polygons), lines(fr.lines), a… in Decal()
100 junctions = fr.junctions; in operator =()
142 for (const auto &it : junctions) { in serialize()
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| H A D | symbol.cpp | 218 return junctions.count(uu) ? &junctions.at(uu) : nullptr; in get_junction()
225 line.to = &junctions.at(line.to.uuid); in update_refs()
226 line.from = &junctions.at(line.from.uuid); in update_refs()
230 arc.to = &junctions.at(arc.to.uuid); in update_refs()
231 arc.from = &junctions.at(arc.from.uuid); in update_refs()
232 arc.center = &junctions.at(arc.center.uuid); in update_refs()
237 …: uuid(sym.uuid), unit(sym.unit), name(sym.name), pins(sym.pins), junctions(sym.junctions), lines(… in Symbol()
250 junctions = sym.junctions; in operator =()
298 for (const auto &it : junctions) { in get_bbox()
339 for (const auto &[uu, it] : ref.junctions) { in apply_expand()
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| H A D | package.cpp | 254 return &junctions.at(uu); in get_junction()
263 …kg.uuid), name(pkg.name), manufacturer(pkg.manufacturer), tags(pkg.tags), junctions(pkg.junctions), in Package()
278 junctions = pkg.junctions; in operator =()
311 line.to = &junctions.at(line.to.uuid); in update_refs()
312 line.from = &junctions.at(line.from.uuid); in update_refs()
316 arc.to = &junctions.at(arc.to.uuid); in update_refs()
317 arc.from = &junctions.at(arc.from.uuid); in update_refs()
318 arc.center = &junctions.at(arc.center.uuid); in update_refs()
366 for (auto &it : junctions) { in expand()
372 map_erase_if(junctions, [](const auto &it) { in expand()
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| /dports/audio/sc3-plugins/sc3-plugins-Version-3.9.0/source/MembraneUGens/ |
| H A D | Membrane.cpp | 73 t_junction *junctions; member
93 t_junction *junctions = unit->junctions; in cycle() local
102 t_junction *junction = &junctions[i]; in cycle()
187 unit->junctions = in Membrane_init()
191 memset((void *) unit->junctions, 0, in Membrane_init()
200 from = &unit->junctions[line->a->id]; in Membrane_init()
201 to = &unit->junctions[line->b->id]; in Membrane_init()
216 t_junction *junction = &unit->junctions[i]; in Membrane_init()
306 RTFree(unit->mWorld, unit->junctions); in Membrane_Dtor()
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| /dports/science/nest/nest-simulator-3.1/doc/userdoc/guides/ |
| H A D | simulations_with_gap_junctions.rst | 1 Simulations with gap junctions
4 **Note:** This documentation describes the usage of gap junctions in
13 Simulations with gap junctions are supported by the Hodgkin-Huxley
16 synapses gap junctions are bidirectional connections. In order to create
35 prevent the creation of incomplete or non-symmetrical gap junctions the
36 creation of gap junctions is restricted to
59 # total number of gap junctions
78 with a fixed number of gap junctions per neuron. With the above script
80 junctions per neuron. E.g. if one desires ``gap_per_neuron = 60`` the
81 total number of gap junctions should be chosen as
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| /dports/biology/hisat2/hisat2-2.2.1/evaluation/simulation/ |
| H A D | init.py | 160 junctions = []
220 junctions = []
240 junctions.append([chr, left, right])
245 return junctions
266 junctions += get_junctions(chr, int(pos), cigar)
268 junctions += get_junctions(chr2, int(pos2), cigar2)
275 for junction in junctions:
278 junctions = []
280 junctions.append(to_junction(junction_str))
283 junctions = sorted(junctions, cmp=junction_cmp)
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| /dports/biology/hisat2/hisat2-2.2.1/ |
| H A D | extract_splice_sites.py | 78 junctions = set()
81 junctions.add((chrom, exons[i-1][1], exons[i][0], strand))
82 junctions = sorted(junctions)
83 for chrom, left, right, strand in junctions:
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| H A D | hisat2_extract_splice_sites.py | 78 junctions = set()
81 junctions.add((chrom, exons[i-1][1], exons[i][0], strand))
82 junctions = sorted(junctions)
83 for chrom, left, right, strand in junctions:
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| /dports/science/PETSc/petsc-3.14.1/src/ts/tutorials/network/wash/ |
| H A D | pipes1.c | 419 Junction junctions=NULL; in WashNetworkCreate() local
474 junctions[i].id = i; in WashNetworkCreate()
512 junctions[i].id = i; in WashNetworkCreate()
516 junctions[0].type = RESERVOIR; in WashNetworkCreate()
517 junctions[1].type = VALVE; in WashNetworkCreate()
518 junctions[2].type = VALVE; in WashNetworkCreate()
550 junctions[i].id = i; in WashNetworkCreate()
555 junctions[1].type = VALVE; in WashNetworkCreate()
571 vtype[i] = junctions[v].type; in WashNetworkCreate()
580 wash->junction = junctions; in WashNetworkCreate()
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| /dports/cad/horizon-eda/horizon-2.1.0/src/import_dxf/ |
| H A D | dxf_importer.cpp | 32 std::set<Junction *> junctions; member in horizon::DXFAdapter
55 …auto j = std::find_if(junctions.begin(), junctions.end(), [&c](auto a) { return a->position == c; … in get_or_create_junction()
56 if (j != junctions.end()) { in get_or_create_junction()
62 junctions.insert(ju); in get_or_create_junction()
214 junctions = adapter.junctions; in import()
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| /dports/biology/star/STAR-2.7.9a/source/ |
| H A D | ParametersChimeric_initialize.cpp | 9 out.junctions=false; in initialize()
27 out.junctions=true; in initialize()
45 if (out.junctions) { in initialize()
91 if (multimapNmax == 0 && (out.junctions || out.samOld)) { in initialize()
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| /dports/cad/horizon-eda/horizon-2.1.0/src/schematic/ |
| H A D | sheet.cpp | 159 junctions.erase(ju.uuid); in merge_net_lines()
241 map_erase_if(junctions, [](auto &x) { in vacuum_junctions()
248 for (auto &[uu, it] : junctions) { in update_junction_connections()
308 if (junctions.count(uu)) { in simplify_net_lines()
329 for (auto &it_junc : junctions) { in fix_junctions()
388 for (auto &it : junctions) { in propagate_net_segments()
458 for (auto &it : junctions) { in propagate_net_segments()
488 for (auto &it : junctions) { in analyze_net_segments()
618 junctions.erase(j->uuid); in merge_junction()
641 return &junctions.at(uu); in get_junction()
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| /dports/biology/py-multiqc/multiqc-1.10/multiqc/modules/ngsderive/ |
| H A D | ngsderive.py | 40 self.junctions = {}
83 self.junctions,
93 self.junctions = self.ignore_samples(self.junctions)
96 …[len(d) for d in [self.strandedness, self.instrument, self.readlen, self.encoding, self.junctions]]
114 if self.junctions:
346 for sample, junctions_data in self.junctions.items():
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| /dports/cad/horizon-eda/horizon-2.1.0/src/util/ |
| H A D | kicad_lib_parser.cpp | 322 std::array<Junction *, 4> junctions; in KiCadSymbolImporter() local
325 junctions[i] = &sym.junctions.emplace(uu, uu).first->second; in KiCadSymbolImporter()
329 junctions[0]->position = Coordi(a.x, a.y); in KiCadSymbolImporter()
330 junctions[1]->position = Coordi(a.x, b.y); in KiCadSymbolImporter()
331 junctions[2]->position = Coordi(b.x, b.y); in KiCadSymbolImporter()
332 junctions[3]->position = Coordi(b.x, a.y); in KiCadSymbolImporter()
337 line.from = junctions.at(i); in KiCadSymbolImporter()
338 line.to = junctions.at(j); in KiCadSymbolImporter()
346 auto ju = &sym.junctions.emplace(j_uu, j_uu).first->second; in KiCadSymbolImporter()
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| /dports/cad/librepcb/librepcb-0.1.6/libs/librepcb/projecteditor/schematiceditor/ |
| H A D | schematicclipboarddata.h | 176 JunctionList junctions; member
182 : netName(netName), junctions(), lines(), labels(), onEdited(*this) {} in NetSegment()
187 junctions(node, fileFormat), in NetSegment()
195 junctions.serialize(root); in serialize()
201 return (netName != rhs.netName) || (junctions != rhs.junctions) ||
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| /dports/lang/p5-List-MoreUtils/List-MoreUtils-0.430/lib/List/ |
| H A D | MoreUtils.pm | 26 my @junctions = qw(any all none notall);
51 my @all_functions = (@junctions, @v0_22, @v0_24, @v0_33, @v0_400, @v0_420);
115 @junctions,
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| /dports/cad/sumo/sumo-1.2.0/src/netload/ |
| H A D | NLBuilder.cpp | 276 MSJunctionControl* junctions = nullptr; in buildNet() local
284 junctions = myJunctionBuilder.build(); in buildNet()
285 junctions->postloadInitContainer(); in buildNet()
306 delete junctions; in buildNet()
312 delete junctions; in buildNet()
318 …myNet.closeBuilding(myOptions, edges, junctions, routeLoaders, tlc, stateDumpTimes, stateDumpFiles, in buildNet()
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| /dports/cad/librepcb/librepcb-0.1.6/libs/librepcb/projecteditor/boardeditor/ |
| H A D | boardclipboarddata.h | 129 JunctionList junctions; member
134 : netName(netName), vias(), junctions(), traces(), onEdited(*this) {} in NetSegment()
140 junctions(node, fileFormat), in NetSegment()
148 junctions.serialize(root); in serialize()
154 (junctions != rhs.junctions) || (traces != rhs.traces);
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