Searched refs:k_ncells_valid (Results 1 – 3 of 3) sorted by relevance
/dports/biology/infernal/infernal-1.1.3/src/ |
H A D | cm_dpalign.c | 865 esl_vec_ISet(shmx->kshadow_mem, shmx->k_ncells_valid, USED_EL); in cm_CYKInsideAlign() 1161 if(shmx->k_ncells_valid > 0) esl_vec_ISet(shmx->kshadow_mem, shmx->k_ncells_valid, 0); in cm_CYKInsideAlignHB() 2225 if(shmx->k_ncells_valid > 0) esl_vec_ISet(shmx->kshadow_mem, shmx->k_ncells_valid, 0); in cm_OptAccAlign() 2563 if(shmx->k_ncells_valid > 0) esl_vec_ISet(shmx->kshadow_mem, shmx->k_ncells_valid, 0); in cm_OptAccAlignHB()
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H A D | cm_mx.c | 1907 mx->k_ncells_valid = 0; in cm_shadow_mx_Create() 2010 mx->k_ncells_valid = k_ncells; in cm_shadow_mx_GrowTo() 2047 assert(k_cur_size == mx->k_ncells_valid); in cm_shadow_mx_GrowTo() 2107 …ncells_alloc: %" PRId64 "\nk_ncells_valid: %" PRId64 "\n", mx->k_ncells_alloc, mx->k_ncells_valid); in cm_shadow_mx_Dump() 2906 mx->k_ncells_valid = 0; in cm_hb_shadow_mx_Create() 3030 mx->k_ncells_valid = k_ncells; in cm_hb_shadow_mx_GrowTo() 3073 ESL_DASSERT1((k_cur_size == mx->k_ncells_valid)); in cm_hb_shadow_mx_GrowTo() 3131 …->M, mx->B, mx->L, mx->y_ncells_alloc, mx->y_ncells_valid, mx->k_ncells_alloc, mx->k_ncells_valid); in cm_hb_shadow_mx_Dump()
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H A D | infernal.h | 1161 int64_t k_ncells_valid; /* current number of valid cells in kshadow */ member 1241 int64_t k_ncells_valid; /* current number of valid cells in kshadow */ member
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