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Searched refs:knownsplicingp (Results 1 – 3 of 3) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgsnap.c407 static bool knownsplicingp = false; variable
2355 knownsplicingp = true; in parse_command_line()
2554 } else if (novelsplicingp == true && knownsplicingp == true) { in parse_command_line()
2572 } else if (knownsplicingp == true) { in parse_command_line()
3345 knownsplicingp = false; in worker_setup()
3352 if (novelsplicingp == true || knownsplicingp == true) { in worker_setup()
3503 novelsplicingp,knownsplicingp,output_type,mode,maskedp); in worker_setup()
H A Dgmap.c471 static bool knownsplicingp = false; variable
6112 case 's': splicing_file = optarg; knownsplicingp = true; break; in parse_command_line()
7012 Stage2_setup(/*splicingp*/novelsplicingp == true || knownsplicingp == true,cross_species_p, in main()
7025 Stage3_setup(/*splicingp*/novelsplicingp == true || knownsplicingp == true,novelsplicingp, in main()
H A Dsubstring.c188 static bool knownsplicingp; variable
5634 knownsplicingp = knownsplicingp_in; in Substring_setup()