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Searched refs:left_pairs (Results 1 – 7 of 7) sorted by relevance

/dports/biology/primer3/primer3-2.3.6/src/
H A Dlibprimer3.c787 interval_arr->left_pairs[c][0] = i1; in p3_add_to_2_interval_array()
788 interval_arr->left_pairs[c][1] = i2; in p3_add_to_2_interval_array()
3143 (k <= sa->ok_regions.left_pairs[i][0] + sa->ok_regions.left_pairs[i][1] - 1)) { in calc_and_check_oligo_features()
3931 if (sa->ok_regions.left_pairs[i][0] == -1) { in characterize_pair()
3941 (l_end <= sa->ok_regions.left_pairs[i][0] + sa->ok_regions.left_pairs[i][1] - 1)) { in characterize_pair()
3948 (l_end <= sa->ok_regions.left_pairs[i][0] + sa->ok_regions.left_pairs[i][1] - 1) && in characterize_pair()
5932 if (sa->ok_regions.left_pairs[i][0] != -1) { in _optimize_ok_regions_list()
5933 ls = sa->ok_regions.left_pairs[i][0]; in _optimize_ok_regions_list()
5934 le = sa->ok_regions.left_pairs[i][0] in _optimize_ok_regions_list()
5935 + sa->ok_regions.left_pairs[i][1] - 1; in _optimize_ok_regions_list()
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H A Dformat_output.c247 print_2_pair_array(f, "PAIR_OK_REGIONS", sa->ok_regions.count, sa->ok_regions.left_pairs, in print_summary()
880 print_2_pair_array(f, "PAIR_OK_REGIONS", sa->ok_regions.count, sa->ok_regions.left_pairs, in format_oligos()
H A Dlibprimer3.h658 int left_pairs[PR_MAX_INTERVAL_ARRAY][2]; member
/dports/biology/py-hits/hits-0.1/hits/
H A Dpaired_end.py125 left_pairs = left_mapping.get_aligned_pairs(matches_only=True)
128 if left_pairs != right_pairs:
/dports/lang/elixir/elixir-1.12.3/lib/elixir/lib/module/types/
H A Dunify.ex631 def subtype?({:map, left_pairs}, {:map, right_pairs}, context) do
632 Enum.all?(left_pairs, fn
/dports/lang/elixir-devel/elixir-1.13.1/lib/elixir/lib/module/types/
H A Dunify.ex610 def subtype?({:map, left_pairs}, {:map, right_pairs}, context) do
611 Enum.all?(left_pairs, fn
/dports/biology/gmap/gmap-2020-09-12/src/
H A Dstage3.c17612 List_T left_pairs, right_pairs; in Stage3_merge_chimera() local
17635 left_pairs = Pairpool_copy(old_left->pairs,pairpool); in Stage3_merge_chimera()
17636 left_pairs = Pair_clip_bounded_list_5(left_pairs,minpos1,maxpos1); in Stage3_merge_chimera()
17642 Pair_dump_list(left_pairs,true); in Stage3_merge_chimera()
17647 if (left_pairs == NULL || right_pairs == NULL) { in Stage3_merge_chimera()
18552 List_T left_pairs, right_pairs, path; in Stage3_merge_local() local
18572 left_pairs = Pairpool_copy(old_left->pairs,pairpool); in Stage3_merge_local()
18573 left_pairs = Pair_clip_bounded_list_5(left_pairs,minpos1,maxpos1); in Stage3_merge_local()
18579 Pair_dump_list(left_pairs,true); in Stage3_merge_local()
18585 path = clean_end_chimera(List_reverse(left_pairs)); in Stage3_merge_local()
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