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/dports/science/afni/afni-AFNI_21.3.16/src/R_scripts/
H A D3dMVM.R1176 tryCatch(out[(lop$nFu+1):(lop$nFu+lop$GES*lop$nFu+lop$nFsc)] <-
1212 tryCatch(out[(lop$nFu+lop$nFsc+length(lop$mvtInd)+lop$nFm+1):
1213 (lop$nFu+lop$nFsc+length(lop$mvtInd)+lop$nFm+lop$nF_mvE5)] <-
1218 if(lop$GES) out[(lop$nF+1):(lop$nF+lop$nFu)] <- uvfm0[,'ges']
1425 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=lop$qVarCenters, scale=F)[,collapse=T]
1545 lop$dataStr <- cbind(lop$dataStr, lop$dataStr[, lop$vQV[1]])
1590 …lop$dataStr <- assVV(lop$dataStr, lop$vQV[1], inData[ii,jj,kk,(lop$NoFile+1):(lop$NoFile+lop$nSubj…
1717 if(lop$mvE5a | lop$mvE5) if(lop$afex_new) lop$nF_mvE5 <- lop$nFu/2 else
1719 lop$nF <- ifelse(lop$mvE5, lop$nF_mvE5, lop$nFu + lop$nFsc + nF_MVT + lop$nFm + lop$nF_mvE5)
1722 NoBrick <- lop$nF + lop$GES*lop$nF + 2*lop$num_glt + lop$num_glf
[all …]
H A D3dMEMA.R65 if(lop$anaType==1 | lop$anaType==2 | lop$anaType==4) {
223 if(lop$nGrp==1) lop$xMat <- rep(1, sum(lop$nSubj))
346 lop$covData <- cbind(lop$covData, lop$covData*lop$xMat[,2])
354 if(dim(lop$covData)[1]==1) lop$covData <- t(lop$covData)
357 } else {lop$nCov <- 0; lop$xMat <- as.matrix(lop$xMat)}
1012 lop$nSubj <- c(lop$nSubj,length(lop$subjLab[[ii]]))
1043 if (lop$nLevel == 1 && lop$homo)lop$anaType <- 2
1071 if (lop$anaType==1 | lop$anaType==2 | lop$anaType==4) {
1193 if(lop$anaType==1 | lop$anaType==2 | lop$anaType==4) {
2288 nBrick <- 4*lop$nGrp+(anyCov)*2*lop$nCov+2*sum(lop$nSubj)*lop$resZout
[all …]
H A D3dLME.R797 if(!is.na(lop$qVars)) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
928 glt <- gl_Constr(lop$num_glt, lop$gltCode, lop)
934 glf <- gl_Constr(lop$num_glf, lop$glfCode, lop)
1438 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=TRUE, scale=F)[,,drop=T] else
1439 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=lop$qVarCenters, scale=F)[,,drop=T]
1462 if(!lop$ICC | lop$ICCb) {
1489 if(lop$LOGIT) inData <- read.AFNI(lop$dataStr[,lop$vQV[1]][1], verb=lop$verb, meth=lop$iometh, forc…
1682 …lop$dataStr <- assVV2(lop$dataStr, lop$vQV, inData[ii,jj,kk,(nrow(lop$dataStr)+1):(2*nrow(lop$data…
1740 lop$Fseq <- 1:lop$nF
1991 …write.AFNI(lop$REprefix, Stat[,,,(lop$NoBrick+1):(lop$NoBrick+(!is.null(lop$REprefix))*nlevels(lop…
[all …]
H A D3dLMEr.R670 if(!is.na(lop$qVars)) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
691 if(!is.na(lop$vVars[1])) for(jj in lop$vQV) lop$dataStr[,jj] <- as.character(lop$dataStr[,jj])
882 if(is.null(lop <- process.LME.opts(lop, verb = lop$verb))) globalVar
904 names(lop$dataStr)[names(lop$dataStr)==lop$IF] <- 'InputFile'
914 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=TRUE, scale=F)[,,drop=T] else
915 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=lop$qVarCenters, scale=F)[,,drop=T]
940 inData <- read.AFNI(lop$dataStr[1, lop$IF], verb=lop$verb, meth=lop$iometh, forcedset = TRUE)
997 lop$dataStr <- cbind(lop$dataStr, lop$dataStr[, lop$vQV[1]])
1043 …lop$dataStr <- assVV2(lop$dataStr, lop$vQV, inData[ii,jj,kk,(nrow(lop$dataStr)+1):(2*nrow(lop$data…
1086 lop$NoBrick <- lop$nF + nT + lop$num_glf
[all …]
H A DMBA.R679 if(is.null(lop <- process.MBA.opts(lop, verb = lop$verb))) globalVar
697 names(lop$dataTable)[names(lop$dataTable)==lop$Subj] <- 'Subj'
698 names(lop$dataTable)[names(lop$dataTable)==lop$Y] <- 'Y'
699 names(lop$dataTable)[names(lop$dataTable)==lop$ROI1] <- 'ROI1'
700 names(lop$dataTable)[names(lop$dataTable)==lop$ROI2] <- 'ROI2'
753 lop$EOIq <- intersect(strsplit(lop$EOI, '\\,')[[1]], lop$EOIq)
786 if(lop$r2z) lop$dataTable$Y <- fisher(lop$dataTable$Y)
793 if(!is.null(lop$se)) names(lop$dataTable)[which(names(lop$dataTable)==lop$se)] <- 'se'
798 lop$dataTable$se <- lop$dataTable$Y/lop$dataTable[[lop$tstat]]
908 ns <- lop$iterations*lop$chains/2
[all …]
H A D3dMSS.R478 if(!is.na(lop$qVars)) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
481 if(lop$bounds[1] > lop$bounds[2])
495 …if(!is.na(lop$qVars)) for(jj in lop$QV) lop$dataStr[,jj] <- as.numeric(as.character(lop$dataStr[,j…
511 … if(!is.na(lop$qVars)) for(jj in lop$QV) lop$Pred[,jj] <- as.numeric(as.character(lop$Pred[,jj]))
512 lop$nr <- nrow(lop$Pred)
521 lop$Pred <- lop$Pred[rep(seq_len(lop$nr), times=nlevels(lop$dataStr[, lop$vt[1]])), ]
522 lop$Pred[,lop$vt[1]] <- as.factor(rep(levels(lop$dataStr[,lop$vt[1]]), each = lop$nr))
544 if(lop$nNodes < 1) lop$nNodes <- 1
722 if(is.null(lop <- process.MSS.opts(lop, verb = lop$verb))) globalVar
741 names(lop$dataStr)[names(lop$dataStr)==lop$IF] <- 'InputFile'
[all …]
H A DRBA.R696 if(is.null(lop <- process.RBA.opts(lop, verb = lop$verb))) globalVar
714 names(lop$dataTable)[names(lop$dataTable)==lop$Subj] <- 'Subj'
715 names(lop$dataTable)[names(lop$dataTable)==lop$Y] <- 'Y'
716 names(lop$dataTable)[names(lop$dataTable)==lop$ROI] <- 'ROI'
758 lop$EOIq <- intersect(strsplit(lop$EOI, '\\,')[[1]], lop$EOIq)
775 if(!is.null(lop$se)) names(lop$dataTable)[which(names(lop$dataTable)==lop$se)] <- 'se'
780 lop$dataTable$se <- lop$dataTable$Y/lop$dataTable[[lop$tstat]]
800 if(lop$r2z) lop$dataTable$Y <- fisher(lop$dataTable$Y)
873 if(lop$scale!=1) lop$dataTable$Y <- (lop$dataTable$Y)*lop$scale
1197 if(any(!is.na(lop$PDP) == TRUE)) plotPDP(lop$EOIq[ii], ps0, nR, lop$PDP[1], lop$PDP[2], 8)
[all …]
H A D3dICC.R485 if(!is.na(lop$qVars)) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
489 if(lop$bounds[1] > lop$bounds[2])
533 if(lop$nNodes < 1) lop$nNodes <- 1
645 if(is.null(lop <- process.ICC.opts(lop, verb = lop$verb))) globalVar
670 names(lop$dataStr)[names(lop$dataStr)==lop$Subj] <- 'Subj'
671 names(lop$dataStr)[names(lop$dataStr)==lop$IF] <- 'InputFile'
672 names(lop$dataStr)[names(lop$dataStr)==lop$tStat] <- 'Tstat'
681 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=TRUE, scale=F)[,,drop=T] else
682 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=lop$qVarCenters, scale=F)[,,drop=T]
727 inData <- read.AFNI(lop$dataStr[1, lop$IF], verb=lop$verb, meth=lop$iometh, forcedset = TRUE)
[all …]
H A D3dISC.R692 if(!is.na(lop$qVars)) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
708 …if(!is.na(lop$qVars)) for(jj in lop$QV) lop$dataStr[,jj] <- as.numeric(as.character(lop$dataStr[,j…
717 if(!is.null(lop$resid)) lop$resid <- paste(lop$resid, "+tlrc", sep="")
735 if(lop$nNodes < 1) lop$nNodes <- 1
864 if(is.null(lop <- process.ISC.opts(lop, verb = lop$verb))) globalVar
890 names(lop$dataStr)[names(lop$dataStr)==lop$IF] <- 'InputFile'
901 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=TRUE, scale=F)[,,drop=T] else
902 lop$dataStr[,lop$QV] <- scale(lop$dataStr[,lop$QV], center=lop$qVarCenters, scale=F)[,,drop=T]
972 inData <- read.AFNI(lop$dataStr[1, lop$IF], verb=lop$verb, meth=lop$iometh, forcedset = TRUE)
1034 …lop$dataStr <- cbind(lop$dataStr, lop$dataStr[, lop$vQV[1]]) …
[all …]
H A DTRR.R553 if(!is.na(lop$qVars[1])) lop$QV <- strsplit(lop$qVars, '\\,')[[1]]
556 if(lop$chains < 1) lop$chains <- 1
598 if(is.null(lop <- process.TRR.opts(lop, verb = lop$verb))) globalVar
616 names(lop$dataTable)[names(lop$dataTable)==lop$subject] <- 'subj'
617 names(lop$dataTable)[names(lop$dataTable)==lop$Y] <- 'Y'
618 names(lop$dataTable)[names(lop$dataTable)==lop$repetition] <- 'rep'
619 names(lop$dataTable)[names(lop$dataTable)==lop$condiiton] <- 'cond'
631 outDF(str(lop$dataTable), lop$outFN)
676 if(!is.null(lop$se)) names(lop$dataTable)[which(names(lop$dataTable)==lop$se)] <- 'se'
681 lop$dataTable$se <- lop$dataTable$Y/lop$dataTable[[lop$tstat]]
[all …]
H A D1dRplot.R300 return(lop)
594 save = {lop$prefix <- ops[[i]]; lop$nodisp=TRUE;} ,
647 other = lop <- parse.1dRplot.other(ops[[i]], lop),
654 return(lop)
659 return(lop)
701 if (is.null(lop$verb) || is.na(lop$verb)) lop$verb <- 0
703 if (is.null(lop <- process.1dRplot.opts(lop, verb = lop$verb))) { globalVar
709 str(lop);
712 thisplot <- plot.1D( dmat = lop$dmat, dmat.err=lop$dmat.err,
714 dmat.TR = lop$dmat.TR, dmat.type = lop$dmat.type,
[all …]
H A D3dMEPFM.R849 lop$datasets <- c(lop$datasets,lop$input[2*(iter_input-1)+1])
850 lop$TEs <- c(lop$TEs,lop$input[2*iter_input])
853 lop$idx_order_TEs <- lop$TEs$ix
854 lop$TEs <- lop$TEs$x
884 …idset <- read.AFNI(lop$datasets[lop$idx_order_TEs[iter_input]], verb = max(0,lop$verb-1), meth=lop…
926 if ((substr(lop$input[1],nchar(lop$input[1])-2,nchar(lop$input[1]))==".1D") ||
927 (substr(lop$input[1],nchar(lop$input[1])-4,nchar(lop$input[1]))==".1D\'")){
955 mdset <- read.AFNI(lop$mask, verb = max(lop$verb-1), meth=lop$iometh)
976 if ( (is.null(lop$hrf)) && (is.null(lop$idx_hrf)) && (is.null(lop$vol_hrfs)) ) {lop$hrf <- 'GAM'}
981 if ((substr(lop$hrf,nchar(lop$hrf)-2,nchar(lop$hrf))==".1D") ||
[all …]
H A D3dSignatures.R97 lop <- list() list
109 lop$verb=0;
121 return(lop)
355 if (lop$svmscale != FALSE && lop$svmscale != TRUE) {
365 if (!is.null(lop$odir) && !file_test('-d', lop$odir)) {
378 lop$thiskeyset <- labelkey.labeltable(lop$thislabset, lop$labeltablefile)
390 if (!is.null(lop$Tset) && length(lop$Tset) > 1) {
404 if (!is.null(lop$tset) && length(lop$tset) > 1) {
419 if (lop$method == 'svm' || lop$method == 'SVM') {
961 if (is.null(lop <- process.SigsClassify.opts(lop, verb = lop$verb))) { globalVar
[all …]
H A D3dPFM.R2183 idset <- read.AFNI(lop$input[1], verb = max(0,lop$verb-1), meth=lop$iometh)
2188 (substr(lop$input[1],nchar(lop$input[1])-4,nchar(lop$input[1]))==".1D\'")){
2225 mdset <- read.AFNI(lop$mask, verb = max(lop$verb-1), meth=lop$iometh)
2248 if ( (is.null(lop$hrf)) && (is.null(lop$idx_hrf)) && (is.null(lop$vol_hrfs)) ) {lop$hrf <- 'GAM'}
2253 if ((substr(lop$hrf,nchar(lop$hrf)-2,nchar(lop$hrf))==".1D") ||
2254 (substr(lop$hrf,nchar(lop$hrf)-4,nchar(lop$hrf))==".1D\'")) {
2329 if (!(substr(lop$hrf,nchar(lop$hrf)-2,nchar(lop$hrf))==".1D") &&
2330 !(substr(lop$hrf,nchar(lop$hrf)-4,nchar(lop$hrf))==".1D\'")) {
2354 if ((substr(lop$hrf,nchar(lop$hrf)-2,nchar(lop$hrf))==".1D") ||
2355 (substr(lop$hrf,nchar(lop$hrf)-3,nchar(lop$hrf))==".1D\'")) {
[all …]
H A D3dRprogDemo.R200 lop$verb <- 0
202 lop$scale <- 6
210 input = lop$input <- c(lop$input, ops[[i]]),
227 str(lop)
236 return(lop)
293 str(lop);
299 if (lop$verb) {
303 idset <- read.AFNI(lop$input[iin], verb = max(0,lop$verb-1), meth=lop$iometh)
316 mdset <- read.AFNI(lop$mask, verb = max(lop$verb-1), meth=lop$iometh)
320 lop$mask, lop$input[iin]));
[all …]
H A DPTA.R284 lop$verb=0
285 return(lop)
293 return(lop)
441 if (is.null(lop$pprefix)) lop$interactive <- TRUE else
911 if (is.null(lop <- process.PTA.opts(lop, verb = lop$verb))) { globalVar
916 str(lop);
935 lop$model <- as.formula(paste0(lop$Y, '~', lop$model))
937 if(is.null(lop$vt)) lop$Pred <- lop$prediction else {
938 lop$Pred <- lop$prediction[rep(seq_len(nr), times=nlevels(lop$dat[, lop$vt[1]])), ]
939 lop$Pred[,lop$vt[1]] <- as.factor(rep(levels(lop$dat[,lop$vt[1]]), each = nr))
[all …]
/dports/devel/py-lazy-object-proxy/lazy-object-proxy-1.6.0/tests/
H A Dtest_lazy_object_proxy.py38 def test_round(lop): argument
882 def test_int(lop): argument
897 def test_add(lop): argument
906 def test_sub(lop): argument
915 def test_mul(lop): argument
924 def test_div(lop): argument
1020 def test_or(lop): argument
1689 a = lop.Proxy.__new__(lop.Proxy)
1690 b = lop.Proxy.__new__(lop.Proxy)
1698 obj = lop.Proxy.__new__(lop.Proxy)
[all …]
H A Dtest_async_py3.py69 def test_gen_1(lop): argument
75 def test_func_1(lop): argument
79 f = lop.Proxy(foo)
94 def test_func_2(lop): argument
102 def test_func_3(lop): argument
111 def test_func_4(lop): argument
141 def test_func_5(lop): argument
165 def test_func_6(lop): argument
582 … return (await lop.Proxy(bar) + await lop.Proxy(wrap)() + await lop.Proxy(lambda: db['b']()()()) +
676 return await lop.Proxy(lambda: Wrapper(lop.Proxy(coro1)))
[all …]
/dports/math/dune-pdelab/dune-pdelab-20c7085389d3eb4f8ca99e1bc60f7fa6036536c8/dune/pdelab/localoperator/
H A Dcallswitch.hh74 ( const LOP& lop, in pattern_volume_post_skeleton()
204 return lop.skip_entity(eg); in skip_entity()
224 ( const LOP& lop, in pattern_volume_post_skeleton()
282 lop.lambda_volume(eg,lfsv,r); in lambda_volume()
299 lop.lambda_boundary(ig,lfsv,r); in lambda_boundary()
416 skip_entity(lop, args...); in __anon113860e40202()
430 pattern_volume(lop, args...); in __anon113860e40402()
459 alpha_volume(lop, args...); in __anon113860e40802()
473 alpha_skeleton(lop, args...); in __anon113860e40a02()
480 alpha_boundary(lop, args...); in __anon113860e40b02()
[all …]
/dports/textproc/metauml/
H A Dlop9 echo "<!-- MetaUML Library of Patterns -->" > lop.html
11 echo "<body>" >> lop.html
12 echo "<h1>MetaUML Library of Patterns</h1>" >> lop.html
13 echo "<h2>UML for LaTeX/MetaPost</h2>" >> lop.html
17 echo "\documentclass{article}" >lop.tex
19 echo "\\title{MetaUML Library of Patterns}" >> lop.tex
20 echo "\\author{Radu-George Radulescu and Ovidiu Gheorghies}" >> lop.tex
21 echo "\\begin{document} \maketitle" >> lop.tex
45 echo "</body></html>" >> lop.html
46 echo "\end{document}" >> lop.tex
[all …]
/dports/print/ghostscript8-x11/ghostscript-8.71/base/
H A Dgsropt.h153 #define lop_rop(lop) ((gs_rop3_t)((lop) & 0xff)) /* must be low-order bits */ argument
168 #define lop_uses_S(lop)\ argument
169 (rop3_uses_S(lop) || ((lop) & (lop_S_transparent | lop_T_transparent)))
171 #define lop_uses_S(lop)\ argument
172 (rop3_uses_S(lop) || ((lop) & lop_S_transparent))
174 #define lop_uses_T(lop)\ argument
175 (rop3_uses_T(lop) || ((lop) & lop_T_transparent))
182 #define lop_is_idempotent(lop) (rop3_is_idempotent(lop) && !(lop & lop_pdf14)) argument
188 #define lop_know_S_0(lop)\ argument
193 (lop & lop_S_transparent ? rop3_D : rop3_know_S_1(lop))
[all …]
/dports/print/ghostscript7-base/ghostscript-7.07/src/
H A Dgsropt.h158 #define lop_rop(lop) ((gs_rop3_t)((lop) & 0xff)) /* must be low-order bits */ argument
173 #define lop_uses_S(lop)\ argument
174 (rop3_uses_S(lop) || ((lop) & (lop_S_transparent | lop_T_transparent)))
176 #define lop_uses_S(lop)\ argument
177 (rop3_uses_S(lop) || ((lop) & lop_S_transparent))
179 #define lop_uses_T(lop)\ argument
180 (rop3_uses_T(lop) || ((lop) & lop_T_transparent))
187 #define lop_is_idempotent(lop) (rop3_is_idempotent(lop) && !(lop & lop_pdf14)) argument
193 #define lop_know_S_0(lop)\ argument
198 (lop & lop_S_transparent ? rop3_D : rop3_know_S_1(lop))
[all …]
/dports/print/ghostscript8-base/ghostscript-8.71/base/
H A Dgsropt.h153 #define lop_rop(lop) ((gs_rop3_t)((lop) & 0xff)) /* must be low-order bits */ argument
168 #define lop_uses_S(lop)\ argument
169 (rop3_uses_S(lop) || ((lop) & (lop_S_transparent | lop_T_transparent)))
171 #define lop_uses_S(lop)\ argument
172 (rop3_uses_S(lop) || ((lop) & lop_S_transparent))
174 #define lop_uses_T(lop)\ argument
175 (rop3_uses_T(lop) || ((lop) & lop_T_transparent))
182 #define lop_is_idempotent(lop) (rop3_is_idempotent(lop) && !(lop & lop_pdf14)) argument
188 #define lop_know_S_0(lop)\ argument
193 (lop & lop_S_transparent ? rop3_D : rop3_know_S_1(lop))
[all …]
/dports/print/ghostscript7-x11/ghostscript-7.07/src/
H A Dgsropt.h158 #define lop_rop(lop) ((gs_rop3_t)((lop) & 0xff)) /* must be low-order bits */ argument
173 #define lop_uses_S(lop)\ argument
174 (rop3_uses_S(lop) || ((lop) & (lop_S_transparent | lop_T_transparent)))
176 #define lop_uses_S(lop)\ argument
177 (rop3_uses_S(lop) || ((lop) & lop_S_transparent))
179 #define lop_uses_T(lop)\ argument
180 (rop3_uses_T(lop) || ((lop) & lop_T_transparent))
187 #define lop_is_idempotent(lop) (rop3_is_idempotent(lop) && !(lop & lop_pdf14)) argument
193 #define lop_know_S_0(lop)\ argument
198 (lop & lop_S_transparent ? rop3_D : rop3_know_S_1(lop))
[all …]
/dports/misc/lazyread/lazyread-2.0/
H A Dlazyread.c191 if (lop.want_color) in create_windows()
354 if (!lop.view_normal) in do_options()
362 if (!lop.special_word) in do_options()
484 lop.y = LINES - 2; in scroll_it()
485 if (lop.pos_changed) in scroll_it()
486 lop.y = lop.pos_changed; in scroll_it()
487 if ((lop.y > LINES - 2) || (lop.y < 1)) in scroll_it()
538 if (lop.case_change) in char_scroll()
540 if (lop.highlight) { in char_scroll()
601 if (lop.beep_ok) in highlight_word()
[all …]

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