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Searched refs:m_exons (Results 1 – 3 of 3) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/
H A Dgnomon_model.hpp406 const TExons& Exons() const { return m_exons; } in Exons()
408 m_exons.clear(); in ClearExons()
414 …ices(int i, const string& f_sig, const string& s_sig) { m_exons[i].m_fsplice_sig = f_sig; m_exons[… in SetSplices()
594 TExons m_exons; member in CGeneModel
595 TExons& MyExons() { return m_exons; } in MyExons()
/dports/biology/cufflinks/cufflinks-2.2.1-89-gdc3b0cb/src/
H A Dgtf_tracking.h703 int m_exons; //number of exons totally missed (not overlapped *at all* by any query exon) variable
749 m_exons=0; in qloci()
836 m_exons+=s.m_exons; in addStats()
H A Dcuffcompare.cpp687 super->m_exons=0; //ref exons with no query overlap in compareLoci2R()
692 if (rexovl[x]==0) super->m_exons++; in compareLoci2R()
1329 stats.m_exons+=loc.uexons.Count(); in collectRLocData()
1578 sn=(100.0*(double)ps->m_exons)/(ps->total_rexons); in reportStats()
1579 fprintf(fout, " Missed exons: %7d/%d\t(%5.1f%%)\n",ps->m_exons, ps->total_rexons, sn); in reportStats()