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Searched refs:maxErrors (Results 1 – 25 of 202) sorted by relevance

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/dports/security/keybase/client-v5.7.1/go/kbfs/libkbfs/
H A Dreporter_simple.go21 maxErrors int member
30 func NewReporterSimple(clock Clock, maxErrors int) *ReporterSimple {
33 maxErrors: maxErrors,
37 if maxErrors >= 1 {
38 rs.errors = make([]ReportedError, maxErrors)
58 if r.maxErrors < 1 {
61 if r.currErrorIndex == r.maxErrors {
82 errors := make([]ReportedError, r.maxErrors)
84 t := r.maxErrors - s
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/yara/
H A Dfind_extender.h127 return maxErrors;
138 TMaxErrors maxErrors)
152 return hIt == hEnd && needleErrors <= maxErrors;
166 TMaxErrors maxErrors)
186 TMaxErrors maxErrors)
206 TMaxErrors maxErrors)
260 return needleErrors <= maxErrors;
274 TMaxErrors maxErrors)
293 return needleErrors <= maxErrors;
340 return needleErrors <= maxErrors;
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/
H A DcompPHSens.cpp25 unsigned maxErrors = 10; in main() local
29 …rrors", "estimate for errors 0,1,...,max-errors", OptionType::Int | OptionType::Label, maxErrors)); in main()
39 getOptionValueLong(parser, "max-errors", maxErrors); in main()
92 for (unsigned i = 0; i <= maxErrors; ++i) in main()
108 options.errorRate = (double)maxErrors / (double)maxLength + 0.00001; in main()
118 for (int idx = length(estLosses) - (3 + maxErrors); idx > 0; idx -= 3 + maxErrors) in main()
125 for (unsigned e = 0; e <= maxErrors; ++e) in main()
H A DreadSimulator.h64 int maxErrors, // how many errors they may have in fillupStartpos() argument
81 … sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * rand() / TEMP_RAND_MAX); in fillupStartpos()
128 int maxErrors, // how many errors they may have
158 resize(bucketCounter, maxErrors, 0);
161 resize(kickOutCount, maxErrors, 0);
167 reserve(modificationPattern, readLength + maxErrors);
214 …fillupStartpos(sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength, forw…
219 int maxEnd = startPos + readLength + maxErrors - 1;
267 countErrors = maxErrors + 1;
289 if (trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/
H A DreadSimulator.h66 int maxErrors, // how many errors they may have in fillupStartpos() argument
83 sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * rand() / TEMP_RAND_MAX); in fillupStartpos()
132 int maxErrors, // how many errors they may have
162 resize(bucketCounter,maxErrors,0);
165 resize(kickOutCount,maxErrors,0);
171 reserve(modificationPattern, readLength + maxErrors);
217 …fillupStartpos(sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength, forw…
222 int maxEnd = startPos + readLength + maxErrors - 1;
267 countErrors = maxErrors + 1;
286 if(trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/www/grafana8/grafana-8.3.6/vendor/github.com/grafana/dskit/ring/
H A Dreplication_set_tracker.go19 maxErrors int member
22 func newDefaultResultTracker(instances []InstanceDesc, maxErrors int) *defaultResultTracker {
24 minSucceeded: len(instances) - maxErrors,
27 maxErrors: maxErrors,
44 return t.numErrors > t.maxErrors
/dports/www/grafana8/grafana-8.3.6/vendor/github.com/cortexproject/cortex/pkg/ring/
H A Dreplication_set_tracker.go19 maxErrors int member
22 func newDefaultResultTracker(instances []InstanceDesc, maxErrors int) *defaultResultTracker {
24 minSucceeded: len(instances) - maxErrors,
27 maxErrors: maxErrors,
44 return t.numErrors > t.maxErrors
/dports/www/grafana8/grafana-8.3.6/vendor/github.com/grafana/loki/vendor/github.com/cortexproject/cortex/pkg/ring/
H A Dreplication_set_tracker.go19 maxErrors int member
22 func newDefaultResultTracker(instances []InstanceDesc, maxErrors int) *defaultResultTracker {
24 minSucceeded: len(instances) - maxErrors,
27 maxErrors: maxErrors,
44 return t.numErrors > t.maxErrors
/dports/biology/seqan1/seqan-1.3.1/apps/razers/
H A DreadSimulator.h66 int maxErrors, // how many errors they may have in fillupStartpos() argument
83 sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * rand() / TEMP_RAND_MAX); in fillupStartpos()
132 int maxErrors, // how many errors they may have
162 resize(bucketCounter,maxErrors,0);
165 resize(kickOutCount,maxErrors,0);
171 reserve(modificationPattern, readLength + maxErrors);
217 …fillupStartpos(sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength, forw…
222 int maxEnd = startPos + readLength + maxErrors - 1;
267 countErrors = maxErrors + 1;
286 if(trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/biology/seqan1/seqan-1.3.1/apps/razers2/
H A DreadSimulator.h66 int maxErrors, // how many errors they may have in fillupStartpos() argument
83 sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * rand() / TEMP_RAND_MAX); in fillupStartpos()
132 int maxErrors, // how many errors they may have
162 resize(bucketCounter,maxErrors,0);
165 resize(kickOutCount,maxErrors,0);
171 reserve(modificationPattern, readLength + maxErrors);
217 …fillupStartpos(sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength, forw…
222 int maxEnd = startPos + readLength + maxErrors - 1;
267 countErrors = maxErrors + 1;
286 if(trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/biology/seqan1/seqan-1.3.1/apps/splazers/
H A DreadSimulator.h66 int maxErrors, // how many errors they may have in fillupStartpos() argument
83 sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * rand() / TEMP_RAND_MAX); in fillupStartpos()
132 int maxErrors, // how many errors they may have
162 resize(bucketCounter,maxErrors,0);
165 resize(kickOutCount,maxErrors,0);
171 reserve(modificationPattern, readLength + maxErrors);
217 …fillupStartpos(sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength, forw…
222 int maxEnd = startPos + readLength + maxErrors - 1;
267 countErrors = maxErrors + 1;
286 if(trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/
H A DreadSimulator.h69 int maxErrors, // how many errors they may have in fillupStartpos() argument
87 sortedStartPos[i] = (int)((seqLength - fragmentSize - maxErrors + 1.0) * dist(rng)); in fillupStartpos()
135 int maxErrors, // how many errors they may have
163 resize(bucketCounter,maxErrors,0);
166 resize(kickOutCount,maxErrors,0);
172 reserve(modificationPattern, readLength + maxErrors);
218 …fillupStartpos(rng, sortedStartPos, numReads, readLength, maxErrors, libSize, libError, seqLength,…
223 int maxEnd = startPos + readLength + maxErrors - 1;
270 countErrors = maxErrors + 1;
289 if(trueLength == readLength || countErrors >= maxErrors)
[all …]
/dports/biology/pbbam/pbbam-0.18.0/include/pbbam/
H A DValidator.h93 const size_t maxErrors = std::numeric_limits<size_t>::max());
104 const size_t maxErrors = std::numeric_limits<size_t>::max());
114 const size_t maxErrors = std::numeric_limits<size_t>::max());
134 const size_t maxErrors = std::numeric_limits<size_t>::max());
148 const size_t maxErrors = std::numeric_limits<size_t>::max());
/dports/math/vtk6/VTK-6.2.0/Rendering/OpenGL2/
H A DvtkOpenGLError.h.in143 int maxErrors, argument
149 for (int i=0; (i<numErrors)&&(i<maxErrors); ++i)
153 if (numErrors>maxErrors)
156 << "More than " << maxErrors
165 int maxErrors, argument
171 (void)maxErrors;
191 while(i < maxErrors && glError != GL_NO_ERROR);
197 (void) maxErrors;
210 const int maxErrors = 16; \
211 unsigned int errCode[maxErrors] = {0}; \
[all …]
/dports/math/vtk6/VTK-6.2.0/Rendering/OpenGL/
H A DvtkOpenGLError.h.in152 int maxErrors, argument
158 for (int i=0; (i<numErrors)&&(i<maxErrors); ++i)
162 if (numErrors>maxErrors)
165 << "More than " << maxErrors
174 int maxErrors, argument
180 (void)maxErrors;
200 while(i < maxErrors && glError != GL_NO_ERROR);
206 (void) maxErrors;
219 const int maxErrors = 16; \
220 unsigned int errCode[maxErrors] = {0}; \
[all …]
/dports/math/vtk8/VTK-8.2.0/Rendering/OpenGL2/
H A DvtkOpenGLError.h.in155 int maxErrors, argument
161 for (int i=0; (i<numErrors)&&(i<maxErrors); ++i)
165 if (numErrors>maxErrors)
168 << "More than " << maxErrors
177 int maxErrors, argument
183 (void)maxErrors;
235 while(i < maxErrors && glError != GL_NO_ERROR);
241 (void) maxErrors;
254 const int maxErrors = 16; \
255 unsigned int errCode[maxErrors] = {0}; \
[all …]
/dports/math/vtk9/VTK-9.1.0/Rendering/OpenGL2/
H A DvtkOpenGLError.h.in155 int maxErrors, argument
161 for (int i=0; (i<numErrors)&&(i<maxErrors); ++i)
165 if (numErrors>maxErrors)
168 << "More than " << maxErrors
177 int maxErrors, argument
183 (void)maxErrors;
235 while(i < maxErrors && glError != GL_NO_ERROR);
241 (void) maxErrors;
254 const int maxErrors = 16; \
255 unsigned int errCode[maxErrors] = {0}; \
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/index/
H A Dshape_threshold.h452 if (errors <= maxErrors)
485 if (errors <= maxErrors)
547 if (maxErrors == 0)
621 for (; i < maxErrors; ++i)
633 if (i < maxErrors) continue;
648 if (i == maxErrors) break;
786 if (errors <= maxErrors)
801 if (errors <= maxErrors)
830 int maxErrors,
924 resize(treshPerError, maxErrors);
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/index/
H A Dshape_threshold.h452 if (errors <= maxErrors)
485 if (errors <= maxErrors)
547 if (maxErrors == 0)
621 for (; i < maxErrors; ++i)
633 if (i < maxErrors) continue;
648 if (i == maxErrors) break;
786 if (errors <= maxErrors)
801 if (errors <= maxErrors)
830 int maxErrors,
924 resize(treshPerError, maxErrors);
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/searchjoin/
H A Dverifier.h115 TErrors maxErrors = getErrors(value(verifier.query), queryId); in _verify() local
118 if (_max(length1, length2) - _min(length1, length2) > maxErrors) in _verify()
129 if (maxErrors == 0) in _verify()
136 TErrors errors = _computeEditDistanceBanded(text1, text2, maxErrors); in _verify()
138 if (errors > maxErrors) in _verify()
H A Djoin.cpp82 unsigned maxErrors; member
90 maxErrors(0), in Options()
171 getArgumentValue(options.maxErrors, parser, 1); in parseCommandLine()
278 db.errors = options.maxErrors; in runJoiner()
318 if (options.maxErrors == 0) in mainWithOptions()
331 if (options.maxErrors == 0) in mainWithOptions()
356 if (options.maxErrors == 0) in mainWithOptions()
369 if (options.maxErrors == 0) in mainWithOptions()
/dports/biology/seqan1/seqan-1.3.1/seqan/index/
H A Dshape_threshold.h482 if (maxErrors == 0)
556 for (; i < maxErrors; ++i)
568 if (i < maxErrors) continue;
570 for (i = 0; i < maxErrors; ++i)
583 if (i == maxErrors) break;
714 if (errors <= maxErrors)
725 if (errors <= maxErrors)
735 if (errors <= maxErrors)
746 if (errors <= maxErrors)
775 int maxErrors,
[all …]
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/index/
H A Dshape_threshold.h483 if (maxErrors == 0)
557 for (; i < maxErrors; ++i)
569 if (i < maxErrors) continue;
584 if (i == maxErrors) break;
715 if (errors <= maxErrors)
726 if (errors <= maxErrors)
736 if (errors <= maxErrors)
747 if (errors <= maxErrors)
776 int maxErrors,
870 resize(treshPerError, maxErrors);
[all …]
/dports/biology/bamutil/bamUtil-1.0.15/src/
H A DValidate.cpp71 int maxErrors = -1; in execute() local
86 LONG_INTPARAMETER("maxErrors", &maxErrors) in execute()
205 while( ( (maxErrors < 0) || (totalErrorRecords < maxErrors) ) && in execute()
271 ((totalErrorRecords < maxErrors) || (maxErrors < 0))) in execute()
293 if(totalErrorRecords == maxErrors) in execute()
295 if(maxErrors == 0) in execute()
/dports/biology/pbbam/pbbam-0.18.0/src/
H A DValidator.cpp375 void Validator::Validate(const BamHeader& header, const size_t maxErrors) in Validate() argument
377 auto errors = std::make_unique<ValidationErrors>(maxErrors); in Validate()
382 void Validator::Validate(const ReadGroupInfo& rg, const size_t maxErrors) in Validate() argument
384 auto errors = std::make_unique<ValidationErrors>(maxErrors); in Validate()
389 void Validator::Validate(const BamRecord& b, const size_t maxErrors) in Validate() argument
391 auto errors = std::make_unique<ValidationErrors>(maxErrors); in Validate()
396 void Validator::ValidateEntireFile(const BamFile& file, const size_t maxErrors) in ValidateEntireFile() argument
398 auto errors = std::make_unique<ValidationErrors>(maxErrors); in ValidateEntireFile()
408 void Validator::ValidateFileMetadata(const BamFile& file, const size_t maxErrors) in ValidateFileMetadata() argument
410 auto errors = std::make_unique<ValidationErrors>(maxErrors); in ValidateFileMetadata()

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