/dports/devel/py-testtools/testtools-2.5.0/testtools/matchers/ |
H A D | _dict.py | 20 def LabelledMismatches(mismatches, details=None): argument 42 mismatches = {} 54 self.mismatches = mismatches 69 mismatches = filter_values(bool, data) 70 if mismatches: 71 return result_mismatch(mismatches) 94 mismatches = {} 98 mismatches[key] = mismatch 99 return mismatches 103 if mismatches: [all …]
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H A D | _higherorder.py | 76 def __init__(self, mismatches, wrap=True): argument 77 self.mismatches = mismatches 84 for mismatch in self.mismatches: 231 mismatches = [] 235 mismatches.append(mismatch) 236 if mismatches: 237 return MismatchesAll(mismatches) 250 mismatches = [] 254 mismatches.append(mismatch) 257 return MismatchesAll(mismatches)
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/dports/databases/mongodb36/mongodb-src-r3.6.23/src/third_party/wiredtiger/test/3rdparty/testtools-0.9.34/testtools/matchers/ |
H A D | _dict.py | 20 def LabelledMismatches(mismatches, details=None): argument 42 mismatches = {} 54 self.mismatches = mismatches 69 mismatches = filter_values(bool, data) 70 if mismatches: 71 return result_mismatch(mismatches) 94 mismatches = {} 98 mismatches[key] = mismatch 99 return mismatches 103 if mismatches: [all …]
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H A D | _higherorder.py | 76 def __init__(self, mismatches, wrap=True): argument 77 self.mismatches = mismatches 84 for mismatch in self.mismatches: 231 mismatches = [] 235 mismatches.append(mismatch) 236 if mismatches: 237 return MismatchesAll(mismatches) 250 mismatches = [] 254 mismatches.append(mismatch) 257 return MismatchesAll(mismatches)
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/dports/biology/vcftools/vcftools-0.1.16/examples/ |
H A D | cmp-test.out | 11 SN Number of REF mismatches: 0 12 SN Number of ALT mismatches: 1 47 #AF 6 .. Hom(RR) mismatches 48 #AF 7 .. Het(RA) mismatches 49 #AF 8 .. Hom(AA) mismatches 50 #AF 9 .. Het(AA) mismatches 61 #DP 5 .. RR -> RA mismatches 62 #DP 6 .. RR -> AA mismatches 63 #DP 7 .. RA -> RR mismatches 64 #DP 8 .. RA -> AA mismatches [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/alnmgr/ |
H A D | score_builder_base.cpp | 652 int mismatches = 0; in GetPercentIdentity() local 666 int mismatches = 0; in GetPercentIdentity() local 681 int mismatches = 0; in GetPercentIdentity() local 724 int mismatches = 0; in GetIdentityCount() local 733 int mismatches = 0; in GetMismatchCount() local 735 return mismatches; in GetMismatchCount() 743 mismatches = 0; in GetMismatchCount() 766 return mismatches; in GetMismatchCount() 775 mismatches = 0; in GetMismatchCount() 797 return mismatches; in GetMismatchCount() [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/alnmgr/ |
H A D | score_builder_base.cpp | 652 int mismatches = 0; in GetPercentIdentity() local 666 int mismatches = 0; in GetPercentIdentity() local 681 int mismatches = 0; in GetPercentIdentity() local 724 int mismatches = 0; in GetIdentityCount() local 733 int mismatches = 0; in GetMismatchCount() local 735 return mismatches; in GetMismatchCount() 743 mismatches = 0; in GetMismatchCount() 766 return mismatches; in GetMismatchCount() 775 mismatches = 0; in GetMismatchCount() 797 return mismatches; in GetMismatchCount() [all …]
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/dports/net/freeswitch/freeswitch-1.10.3.-release/libs/spandsp/tests/ |
H A D | gsm0610_tests.c | 300 int mismatches; in perform_linear_test() local 316 for (i = 0, mismatches = 0; i < xxx; i++) in perform_linear_test() 321 mismatches++; in perform_linear_test() 325 if (mismatches) in perform_linear_test() 345 mismatches++; in perform_linear_test() 348 if (mismatches) in perform_linear_test() 365 int mismatches; in perform_law_test() local 399 mismatches++; in perform_law_test() 402 if (mismatches) in perform_law_test() 433 mismatches++; in perform_law_test() [all …]
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/dports/comms/spandsp/spandsp-284fe91/tests/ |
H A D | gsm0610_tests.c | 300 int mismatches; in perform_linear_test() local 316 for (i = 0, mismatches = 0; i < xxx; i++) in perform_linear_test() 321 mismatches++; in perform_linear_test() 325 if (mismatches) in perform_linear_test() 345 mismatches++; in perform_linear_test() 348 if (mismatches) in perform_linear_test() 365 int mismatches; in perform_law_test() local 399 mismatches++; in perform_law_test() 402 if (mismatches) in perform_law_test() 433 mismatches++; in perform_law_test() [all …]
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/dports/net/iaxmodem/iaxmodem-1.2.0/lib/spandsp/tests/ |
H A D | gsm0610_tests.c | 304 int mismatches; in perform_linear_test() local 320 for (i = 0, mismatches = 0; i < xxx; i++) in perform_linear_test() 325 mismatches++; in perform_linear_test() 329 if (mismatches) in perform_linear_test() 349 mismatches++; in perform_linear_test() 352 if (mismatches) in perform_linear_test() 369 int mismatches; in perform_law_test() local 403 mismatches++; in perform_law_test() 406 if (mismatches) in perform_law_test() 437 mismatches++; in perform_law_test() [all …]
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/dports/devel/py-pyparsing2/pyparsing-2.4.7/examples/ |
H A D | partial_gene_match.py | 50 mismatches = [] 55 mismatches.append(seqloc) 56 if len(mismatches) > self.maxMismatches: 70 return loc, (instring[start:loc],mismatches) 78 matched, mismatches = t[0] variable 81 if mismatches: 82 print(" ", ''.join(' ' if i not in mismatches else '*'
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/dports/biology/p5-BioPerl/BioPerl-1.7.7/lib/Bio/Search/HSP/ |
H A D | PSLHSP.pm | 97 $mismatches) = $self->_rearrange([qw(QUERY_GAPBLOCKS 103 $self->mismatches($mismatches) if defined $mismatches; 146 sub mismatches{ subroutine
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/dports/www/typo3-9/typo3_src-9.5.31/typo3/sysext/install/Classes/SystemEnvironment/ServerResponse/ |
H A D | FileDeclaration.php | 123 $mismatches = []; 127 $mismatches[] = $result; 129 return $mismatches; 135 $mismatches[] = new StatusMessage( 142 $mismatches[] = new StatusMessage( 150 $mismatches[] = new StatusMessage( 158 $mismatches[] = new StatusMessage( 164 return $mismatches;
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/dports/www/typo3-10/typo3_src-10.4.25/typo3/sysext/install/Classes/SystemEnvironment/ServerResponse/ |
H A D | FileDeclaration.php | 123 $mismatches = []; 127 $mismatches[] = $result; 129 return $mismatches; 135 $mismatches[] = new StatusMessage( 142 $mismatches[] = new StatusMessage( 150 $mismatches[] = new StatusMessage( 158 $mismatches[] = new StatusMessage( 164 return $mismatches;
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/dports/www/typo3-11/typo3_src-11.5.7/typo3/sysext/install/Classes/SystemEnvironment/ServerResponse/ |
H A D | FileDeclaration.php | 123 $mismatches = []; 127 $mismatches[] = $result; 129 return $mismatches; 135 $mismatches[] = new StatusMessage( 142 $mismatches[] = new StatusMessage( 150 $mismatches[] = new StatusMessage( 158 $mismatches[] = new StatusMessage( 164 return $mismatches;
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/dports/security/s2n/s2n-tls-1.1.2/tests/sidetrail/working/patches/ |
H A D | cbc.patch | 21 + int mismatches = old_mismatches; 26 + mismatches |= (decrypted->data[j] ^ padding_length) & mask; 28 + return mismatches; 70 - return 0 - mismatches; 73 + // return 0 - mismatches; 82 - mismatches |= (decrypted->data[j] ^ padding_length) & mask; 84 + mismatches = double_loop(mismatches, decrypted, check, cutoff, padding_length); 87 + // mismatches |= (decrypted->data[j] ^ padding_length) & mask; 90 S2N_ERROR_IF(mismatches, S2N_ERR_CBC_VERIFY);
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/discovery/alignment/ |
H A D | AlignmentInterval.java | 73 public final int mismatches; field in AlignmentInterval 160 this.mismatches = mismatches; in AlignmentInterval() 194 if (mismatches == NO_NM) { in appendSATagString() 197 builder.append(mismatches); in appendSATagString() 296 this.mismatches = alignment.getNMismatches(); in AlignmentInterval() 322 this.mismatches = mismatches; in AlignmentInterval() 396 mismatches = input.readInt(); in AlignmentInterval() 410 output.writeInt(mismatches); in serialize() 465 if (mismatches != that.mismatches) return false; in equals() 480 result = 31 * result + mismatches; in hashCode() [all …]
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/dports/biology/sra-tools/sra-tools-2.11.0/tools/sra-pileup/ |
H A D | pileup_counters.c | 180 uint32_t mismatches[ 4 ]; member 198 counters->mismatches[ i ] = 0; in clear_counters() 225 case 'A' : ( counters->mismatches[ 0 ] )++; break; in walk_counter_state() 281 rc = KOutMsg( "\t%u-A", counters->mismatches[ 0 ] ); in print_counter_line() 284 rc = KOutMsg( "\t%u-C", counters->mismatches[ 1 ] ); in print_counter_line() 287 rc = KOutMsg( "\t%u-G", counters->mismatches[ 2 ] ); in print_counter_line() 290 rc = KOutMsg( "\t%u-T", counters->mismatches[ 3 ] ); in print_counter_line() 382 uint32_t total_mismatches = counters->mismatches[ 0 ] + in print_mismatches_line() 383 counters->mismatches[ 1 ] + in print_mismatches_line() 384 counters->mismatches[ 2 ] + in print_mismatches_line() [all …]
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/dports/devel/py-testtools/testtools-2.5.0/testtools/tests/twistedsupport/ |
H A D | test_matchers.py | 25 def mismatches(description, details=None): function 68 mismatch, mismatches(Equals( 80 mismatch, mismatches(Equals( 128 mismatches(Equals(mismatch.describe()), 137 mismatches( 149 mismatches( 180 mismatches(Equals(mismatch.describe()), 190 mismatches(Equals( 200 mismatches(Equals(
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/dports/biology/fastx-toolkit/fastx_toolkit-0.0.14/src/fastx_clipper/ |
H A D | fastx_clipper.cpp | 162 int mismatches = alignment_results.mismatches ; in adapter_cutoff_index() 167 mismatches += alignment_results.target_start ; in adapter_cutoff_index() 177 mismatches += missing_from_end ; in adapter_cutoff_index() 183 << " mismatches = " << mismatches in adapter_cutoff_index() 186 if (mismatches > max_mismatches) in adapter_cutoff_index() 194 alignment_results.mismatches + in adapter_cutoff_index() 210 alignment_results.mismatches == 0 ) { in adapter_cutoff_index()
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | trimest.c | 30 ajint minlength, ajint mismatches); 53 ajint mismatches; in main() local 63 mismatches = ajAcdGetInt("mismatches"); in main() 78 tail5 = trimest_get_tail(seq, 5, minlength, mismatches); in main() 79 tail3 = trimest_get_tail(seq, 3, minlength, mismatches); in main() 155 ajint minlength, ajint mismatches) in trimest_get_tail() argument 216 if(mismatchcount > mismatches) in trimest_get_tail()
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/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
H A D | primersearch.output | 22 CACACATGCACATGCAC hits forward strand at 27 with 0 mismatches 23 AGTGACACCAGCAGGG hits reverse strand at [103] with 0 mismatches 48 CACACATGCACATGCAC hits forward strand at 49 with 2 mismatches 49 AGTGACACCAGCAGGG hits reverse strand at [103] with 0 mismatches 54 CACACATGCACATGCAC hits forward strand at 27 with 0 mismatches 55 AGTGACACCAGCAGGG hits reverse strand at [103] with 0 mismatches
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H A D | vectorstrip.output | 13 From 67 to 83 with 0 mismatches 15 From 205 to 219 with 0 mismatches 37 From 43 to 61 with 0 mismatches 39 From 183 to 199 with 0 mismatches 56 From 40 to 58 with 0 mismatches 58 From 180 to 196 with 0 mismatches
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/dports/lang/rust/rustc-1.58.1-src/src/test/ui/array-slice-vec/ |
H A D | slice-pat-type-mismatches.stderr | 2 --> $DIR/slice-pat-type-mismatches.rs:26:11 8 --> $DIR/slice-pat-type-mismatches.rs:3:9 14 --> $DIR/slice-pat-type-mismatches.rs:18:9 20 --> $DIR/slice-pat-type-mismatches.rs:23:9 26 --> $DIR/slice-pat-type-mismatches.rs:34:9
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/dports/biology/bamutil/bamUtil-1.0.15/test/expected/ |
H A D | seqBases.sam | 12 …S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATAACTAGAAAGGG I000I0III??IIII XN:Z:1 mismatches, 1 clipped from … 13 …S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATAACTAGGAAGGG I000I0III??IIII XN:Z:2 mismatches, 2 clipped from … 14 …H2S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATTTCTAGATAGGG I00?00III??IIII XN:Z:mismatches from front so fi… 15 …H2S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATTTCATGATAGGG I00?00III??IIII XN:Z:mismatches from front so fi… 16 …S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATATCAAGTTAGGG I00?00III??IIII XN:Z:3 mismatches, no clips, but f… 17 …13 0 3H2S3M2D3M1I1M3N1M1P1M3S = 10011 0 AATATCAAGTTAGGG I000000II!?IIII XN:Z:3 mismatches, no clips
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