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/dports/devel/tcllib/tcllib-1.20/modules/struct/
H A Dmatrix1.test52 matrix mymatrix
59 matrix mymatrix
66 matrix mymatrix
73 matrix mymatrix
80 matrix mymatrix
151 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
159 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
167 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
176 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
187 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
[all …]
H A Dmatrix.test151 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
159 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
167 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
176 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
187 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
272 set result [list [mymatrix cellsize 0 0] [mymatrix columnwidth 1] [mymatrix rowheight 1]]
370 set result [list [mymatrix cellsize 0 0] [mymatrix columnwidth 0] [mymatrix rowheight 0]]
2032 set result [list [mymatrix rows] [mymatrix columns]]
2062 set result [list [mymatrix rows] [mymatrix columns] [mymatrix get rect 0 0 1 2]]
2074 set result [list [mymatrix rows] [mymatrix columns] [mymatrix get rect 0 0 2 1]]
[all …]
/dports/devel/tcllibc/tcllib-1.20/modules/struct/
H A Dmatrix1.test52 matrix mymatrix
59 matrix mymatrix
66 matrix mymatrix
73 matrix mymatrix
80 matrix mymatrix
151 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
159 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
167 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
176 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
187 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
[all …]
H A Dmatrix.test151 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
159 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
167 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
176 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
187 set result [list [mymatrix rows] [mymatrix columns] [mymatrix cells]]
272 set result [list [mymatrix cellsize 0 0] [mymatrix columnwidth 1] [mymatrix rowheight 1]]
370 set result [list [mymatrix cellsize 0 0] [mymatrix columnwidth 0] [mymatrix rowheight 0]]
2032 set result [list [mymatrix rows] [mymatrix columns]]
2062 set result [list [mymatrix rows] [mymatrix columns] [mymatrix get rect 0 0 1 2]]
2074 set result [list [mymatrix rows] [mymatrix columns] [mymatrix get rect 0 0 2 1]]
[all …]
/dports/science/plumed/plumed2-2.7.2/src/adjmat/
H A DActionWithInputMatrix.cpp41 mymatrix(NULL) in ActionWithInputMatrix()
52 if( mymatrix ) break ; in ActionWithInputMatrix()
57 if( mymatrix->undirectedGraph() ) nnodes = (mymatrix->function)->ablocks[0].size(); in ActionWithInputMatrix()
58 else nnodes = (mymatrix->function)->ablocks[0].size() + (mymatrix->function)->ablocks[1].size(); in ActionWithInputMatrix()
64 return (mymatrix->function)->getNumberOfDerivatives(); in getNumberOfDerivatives()
68 return (mymatrix->function)->ablocks[0].size(); in getNumberOfNodes()
72 return mymatrix; in getAdjacencyVessel()
101 if( !mymatrix->matrixElementIsActive( i, j ) ) return; in addConnectionDerivatives()
113 MultiValue& myder=mymatrix->getTemporyMultiValue(0); in getInputDerivatives()
118 …MultiValue myvals( (mymatrix->function)->getNumberOfQuantities(), (mymatrix->function)->getNumberO… in getInputDerivatives()
[all …]
H A DDumpGraph.cpp48 AdjacencyMatrixVessel* mymatrix; member in PLMD::adjmat::DumpGraph
80 mymatrix(NULL) in DumpGraph()
89 mymatrix = dynamic_cast<AdjacencyMatrixVessel*>( mm->getPntrToVessel(i) ); in DumpGraph()
90 if( mymatrix ) break ; in DumpGraph()
92 if( !mymatrix ) error( mm->getLabel() + " does not calculate an adjacency matrix"); in DumpGraph()
93 if( !mymatrix->isSymmetric() ) error("input contact matrix must be symmetric"); in DumpGraph()
94 if( maxconnections==0 ) maxconnections=mymatrix->getNumberOfRows(); in DumpGraph()
104 for(unsigned i=0; i<mymatrix->getNumberOfRows(); ++i) ofile.printf("%u [label=\"%u\"];\n",i,i); in update()
106 …unsigned nedge; std::vector<std::pair<unsigned,unsigned> > edge_list( mymatrix->getNumberOfRows()*… in update()
107 mymatrix->retrieveEdgeList( nedge, edge_list ); in update()
H A DMatrixColumnSums.cpp88 …if( (mymatrix->getMatrixAction())->mybasemulticolvars.size()>0 ) error("matrix row sums should onl… in MatrixColumnSums()
90 unsigned ncols = mymatrix->getNumberOfColumns(); in MatrixColumnSums()
94 if( mymatrix->undirectedGraph() ) { in MatrixColumnSums()
97 for(unsigned i=0; i<ncols; ++i) ablocks[0][i]=mymatrix->getNumberOfRows() + i; in MatrixColumnSums()
103 double sum=0.0; std::vector<double> tvals( mymatrix->getNumberOfComponents() ); in compute()
104 unsigned nrows = mymatrix->getNumberOfRows(); in compute()
106 if( mymatrix->undirectedGraph() && tinded==i ) continue; in compute()
111 MultiValue myvals( mymatrix->getNumberOfComponents(), myatoms.getNumberOfDerivatives() ); in compute()
114 if( mymatrix->isSymmetric() && tinded==i ) continue ; in compute()
H A DMatrixRowSums.cpp88 …if( (mymatrix->getMatrixAction())->mybasemulticolvars.size()>0 ) warning("matrix row may be proble… in MatrixRowSums()
90 unsigned nrows = mymatrix->getNumberOfRows(); in MatrixRowSums()
97 std::vector<double> tvals( mymatrix->getNumberOfComponents() ); in compute()
H A DAdjacencyMatrixVessel.cpp87 …atrixVessel::retrieveMatrix( DynamicList<unsigned>& myactive_elements, Matrix<double>& mymatrix ) { in retrieveMatrix() argument
96 if( symmetric ) mymatrix(k,j)=mymatrix(j,k)=vals[0]*vals[1]; in retrieveMatrix()
97 else mymatrix(k,j)=vals[0]*vals[1]; in retrieveMatrix()
/dports/devel/tcllib/tcllib-1.20/modules/report/
H A Dreport.test787 mymatrix destroy
797 mymatrix destroy
810 mymatrix destroy
828 mymatrix destroy
853 mymatrix destroy
880 mymatrix destroy
929 mymatrix destroy
977 mymatrix destroy
1005 mymatrix destroy
1033 mymatrix destroy
[all …]
/dports/devel/tcllibc/tcllib-1.20/modules/report/
H A Dreport.test787 mymatrix destroy
797 mymatrix destroy
810 mymatrix destroy
828 mymatrix destroy
853 mymatrix destroy
880 mymatrix destroy
929 mymatrix destroy
977 mymatrix destroy
1005 mymatrix destroy
1033 mymatrix destroy
[all …]
/dports/science/plumed/plumed2-2.7.2/src/tools/
H A DKernelFunctions.cpp169 Invert(mymatrix,myinv); double logd; in normalize()
274 Invert(mymatrix,myinv); in getContinuousSupport()
318 Matrix<double> mymatrix( getMatrix() ); in evaluate() local
319 for(unsigned i=0; i<mymatrix.nrows(); ++i) { in evaluate()
322 for(unsigned j=0; j<mymatrix.ncols(); ++j) { in evaluate()
326 derivatives[i]+=mymatrix(i,j)*dp_j; in evaluate()
327 r2+=dp_i*dp_j*mymatrix(i,j); in evaluate()
342 Matrix<double> mymatrix( getMatrix() ); in evaluate() local
343 for(unsigned i=0; i<mymatrix.nrows(); ++i) { in evaluate()
346 r2+=2*( 1 - costmp[i] )*mymatrix(i,i); in evaluate()
[all …]
H A DKernelFunctions.h72 unsigned k=0, ncv=ndim(); Matrix<double> mymatrix(ncv,ncv); in getMatrix()
75 mymatrix(i,j)=mymatrix(j,i)=width[k]; // recompose the full inverse matrix in getMatrix()
79 return mymatrix; in getMatrix()
/dports/converters/R-cran-jsonlite/jsonlite/inst/doc/
H A Djson-aaquickstart.R47 mymatrix <- fromJSON(json) globalVar
48 mymatrix
51 toJSON(mymatrix, pretty = TRUE)
H A Djson-aaquickstart.Rmd100 mymatrix <- fromJSON(json)
101 mymatrix
107 toJSON(mymatrix, pretty = TRUE)
/dports/math/scilab/scilab-6.1.1/scilab/modules/sparse/tests/unit_tests/
H A Dconjgrad_list.tst16 mymatrix=[ 94 0 0 0 0 28 0 0 32 0
36 function y=Atimesx(x,mymatrix)
37 y=mymatrix*x
40 Alist = list(Atimesx,mymatrix);
H A Dconjgrad_list.dia.ref14 mymatrix=[ 94 0 0 0 0 28 0 0 32 0
34 function y=Atimesx(x,mymatrix)
35 y=mymatrix*x
38 Alist = list(Atimesx,mymatrix);
H A Dconjgrad_function.tst27 mymatrix=[ 94 0 0 0 0 28 0 0 32 0
37 y=mymatrix*x
H A Dconjgrad_function.dia.ref25 mymatrix=[ 94 0 0 0 0 28 0 0 32 0
35 y=mymatrix*x
/dports/math/igraph/igraph-0.9.5/src/scg/
H A Dscg.c998 IGRAPH_CHECK(igraph_matrix_resize(mymatrix, n, n)); in igraph_i_matrix_laplacian()
1013 MATRIX(*mymatrix, i, j) = - MATRIX(*matrix, i, j); in igraph_i_matrix_laplacian()
1015 MATRIX(*mymatrix, i, i) = VECTOR(degree)[i]; in igraph_i_matrix_laplacian()
1081 IGRAPH_CHECK(igraph_matrix_copy(mymatrix, matrix)); in igraph_i_matrix_stochastic()
1801 mymatrix = &real_matrix; in igraph_scg_stochastic()
1803 IGRAPH_FINALLY(igraph_matrix_destroy, mymatrix); in igraph_scg_stochastic()
1880 if (mymatrix) { in igraph_scg_stochastic()
1899 if (mymatrix) { in igraph_scg_stochastic()
1994 igraph_matrix_destroy(mymatrix); in igraph_scg_stochastic()
2158 mymatrix = &real_matrix; in igraph_scg_laplacian()
[all …]
/dports/math/R-cran-igraph/igraph/src/
H A Dscg.c986 IGRAPH_CHECK(igraph_matrix_resize(mymatrix, n, n)); in igraph_i_matrix_laplacian()
1001 MATRIX(*mymatrix, i, j) = - MATRIX(*matrix, i, j); in igraph_i_matrix_laplacian()
1003 MATRIX(*mymatrix, i, i) = VECTOR(degree)[i]; in igraph_i_matrix_laplacian()
1069 IGRAPH_CHECK(igraph_matrix_copy(mymatrix, matrix)); in igraph_i_matrix_stochastic()
1795 mymatrix = &real_matrix; in igraph_scg_stochastic()
1797 IGRAPH_FINALLY(igraph_matrix_destroy, mymatrix); in igraph_scg_stochastic()
1874 if (mymatrix) { in igraph_scg_stochastic()
1893 if (mymatrix) { in igraph_scg_stochastic()
1988 igraph_matrix_destroy(mymatrix); in igraph_scg_stochastic()
2151 mymatrix = &real_matrix; in igraph_scg_laplacian()
[all …]
/dports/cad/opencascade/opencascade-7.6.0/src/gp/
H A Dgp_Trsf.cxx933 Standard_Real mymatrix[3][3]; in InitFromJson() local
934 …CCT_INIT_VECTOR_CLASS (aStreamStr, "Matrix", aPos, 9, &mymatrix[0][0], &mymatrix[0][1], &mymatrix[… in InitFromJson()
935 … &mymatrix[1][0], &mymatrix[1][1], &mymatrix[1][2], in InitFromJson()
936 … &mymatrix[2][0], &mymatrix[2][1], &mymatrix[2][2]) in InitFromJson()
941 matrix.SetValue (i + 1, j + 1, mymatrix[i][j]); in InitFromJson()
/dports/science/plumed/plumed2-2.7.2/src/bias/
H A DMetaD.cpp1367 Matrix<double> mymatrix(ncv,ncv); in writeGaussian() local
1372 mymatrix(i,j)=mymatrix(j,i)=hill.sigma[k]; in writeGaussian()
1378 Invert(mymatrix,invmatrix); in writeGaussian()
1455 Matrix<double> mymatrix(ncv,ncv); in getGaussianSupport() local
1459 mymatrix(i,j)=mymatrix(j,i)=hill.sigma[k]; in getGaussianSupport()
1465 Invert(mymatrix,myinv); in getGaussianSupport()
1539 Matrix<double> mymatrix(ncv,ncv); in getGaussianNormalization() local
1542 mymatrix(i,j)=mymatrix(j,i)=hill.sigma[k]; // recompose the full inverse matrix in getGaussianNormalization()
1576 Matrix<double> mymatrix(ncv,ncv); in evaluateGaussian() local
1579 mymatrix(i,j)=mymatrix(j,i)=hill.sigma[k]; // recompose the full inverse matrix in evaluateGaussian()
[all …]
/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/
H A Dprophecy.usage15 Enter a name for the profile [mymatrix]: <b>globins</b>
38 Enter a name for the profile [mymatrix]: <b>globins</b>
/dports/converters/R-cran-jsonlite/jsonlite/vignettes/
H A Djson-aaquickstart.Rmd100 mymatrix <- fromJSON(json)
101 mymatrix
107 toJSON(mymatrix, pretty = TRUE)

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