/dports/textproc/senna/senna-1.1.5/bindings/ruby/test/advanced-api-test/ |
H A D | test_index_advanced.rb | 102 assert_equal(2, rcs.nhits) 106 assert_equal(2, rcs.nhits) 110 assert_equal(1, rcs.nhits) 140 assert_equal(3, rcs.nhits) 147 assert_equal(1, rcs.nhits) 155 assert_equal(1, rcs.nhits) 164 assert_equal(2, rcs.nhits) 174 assert_equal(1, rcs.nhits) 176 assert_equal(0, rcs.nhits) 179 assert_equal(1, rcs.nhits) [all …]
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H A D | test_query_advanced.rb | 60 assert_equal(2, rc1.nhits) 62 assert_equal(2, rc2.nhits) 64 assert_equal(2, rc3.nhits) 69 assert_equal(3, rc.nhits) 74 assert_equal(1, rc.nhits) 78 assert_equal(1, rc.nhits) 82 assert_equal(2, rc.nhits) 92 assert_equal(3, rc.nhits) 98 assert_equal(1, rc.nhits) 103 assert_equal(1, rc.nhits) [all …]
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H A D | test_records_advanced.rb | 35 assert_equal(3, rcsa.nhits) 42 assert_equal(1, rcsb.nhits) 50 assert_equal(1, rcsa.nhits) 58 assert_equal(1, rcsa.nhits) 60 assert_equal(1, rcsb.nhits) 106 assert_equal(4, rcs.nhits) 108 assert_equal(3, rcs.nhits) 116 assert_equal(2, rcs.nhits)
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/dports/textproc/senna/senna-1.1.5/bindings/ruby/test/basic-api-test/ |
H A D | test_index_update.rb | 26 assert_equal(1, rcs.nhits) 36 assert_equal(1, rcs.nhits) 45 assert_equal(MANY, rcs.nhits) 69 assert_equal(1, rcs.nhits) 74 assert_equal(1, rcs.nhits) 81 assert_equal(1, rcs.nhits) 86 assert_equal(1, rcs.nhits) 93 assert_equal(1, rcs.nhits) 98 assert_equal(1, rcs.nhits) 105 assert_equal(1, rcs.nhits) [all …]
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/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | ladder.c | 74 int *nhits; member 92 int nhits, i; in Ladder_check() local 118 nhits = 0; in Ladder_check() 122 nhits++; in Ladder_check() 125 assert(nhits == this->nhits[score]); in Ladder_check() 225 this->nhits[score] = *nhits; in Ladder_hits_for_score() 683 dest->nhits[score] += source->nhits[score]; in Ladder_merge() 698 nhits[score] = dest->nhits[score]; in Ladder_merge() 702 nhits[score] = dest->nhits[score] + source->nhits[score]; in Ladder_merge() 727 if ((nhits[score] = source->nhits[score]) > 0) { in Ladder_merge() [all …]
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/test/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 72 int nhits; in main() local 84 nhits = Integer.parseInt(nStr); in main() 86 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 88 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 131 void console(final int num, final int nhits) { in console() argument 145 for( int i = 0; i < nhits; i++ ) { in console() 206 static int nhits; field in MultiBreakpointsTest 229 nhits = 100; in main() 231 nhits = Integer.parseInt(countStr); in main() 234 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/test/jdk/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 71 int nhits; in main() local 83 nhits = Integer.parseInt(nStr); in main() 85 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 87 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 130 void console(final int num, final int nhits) { in console() argument 144 for( int i = 0; i < nhits; i++ ) { in console() 205 static int nhits; field in MultiBreakpointsTest 228 nhits = 100; in main() 230 nhits = Integer.parseInt(countStr); in main() 233 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/jdk/test/com/sun/jdi/ |
H A D | MultiBreakpointsTest.java | 72 int nhits; in main() local 84 nhits = Integer.parseInt(nStr); in main() 86 System.out.println("Debuggee: nthreads = " + nthreads + ", nhits = " + nhits); in main() 88 MultiBreakpointsTarg ptr = new MultiBreakpointsTarg(nthreads, nhits); in main() 131 void console(final int num, final int nhits) { in console() argument 145 for( int i = 0; i < nhits; i++ ) { in console() 206 static int nhits; field in MultiBreakpointsTest 229 nhits = 100; in main() 231 nhits = Integer.parseInt(countStr); in main() 234 args = new String[] { "-J-Dnthreads=" + nthreads, "-J-Dnhits=" + nhits} ; in main() [all …]
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/dports/biology/infernal/infernal-1.1.3/hmmer/testsuite/ |
H A D | i19-hmmpgmd-ga.pl | 112 $nhits = 0; 119 $resultline[$nhits] = $line; 120 $bitscore[$nhits] = $2; 121 $nhits++; 135 if ($nhits == 3) { die "FAIL: ga thresholds not applied?"; } 136 if ($nhits != 1 && $resultline[0] ne $expected_line) { $daemon_active=1; tear_down(); die "FAIL: di…
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H A D | i22-hmmpgmd-shard-ga.pl | 94 $nhits = 0; 101 $resultline[$nhits] = $line; 102 $bitscore[$nhits] = $2; 103 $nhits++; 117 if ($nhits == 3) { die "FAIL: ga thresholds not applied?"; } 118 if ($nhits != 1 && $resultline[0] ne $expected_line) { $daemon_active=1; tear_down(); die "FAIL: di…
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/dports/biology/hmmer/hmmer-3.3/testsuite/ |
H A D | i19-hmmpgmd-ga.pl | 112 $nhits = 0; 119 $resultline[$nhits] = $line; 120 $bitscore[$nhits] = $2; 121 $nhits++; 135 if ($nhits == 3) { die "FAIL: ga thresholds not applied?"; } 136 if ($nhits != 1 && $resultline[0] ne $expected_line) { $daemon_active=1; tear_down(); die "FAIL: di…
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H A D | i22-hmmpgmd-shard-ga.pl | 94 $nhits = 0; 101 $resultline[$nhits] = $line; 102 $bitscore[$nhits] = $2; 103 $nhits++; 117 if ($nhits == 3) { die "FAIL: ga thresholds not applied?"; } 118 if ($nhits != 1 && $resultline[0] ne $expected_line) { $daemon_active=1; tear_down(); die "FAIL: di…
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/dports/biology/hmmer/hmmer-3.3/easel/demotic/ |
H A D | demotic_hmmer.pm | 38 $nhits = 0; # Number of entries in the hit list 87 $hit_target[$nhits] = $6; 89 $hit_bitscore[$nhits] = $2; 90 $hit_Eval[$nhits] = $1; 91 $nhits++; 114 $ali_hitidx[$nali] = $nhits-1; 209 for ($i = 0; $i < $nhits; $i++) {
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H A D | demotic_h2.pm | 34 $nhits = 0; # Number of entries in the hit list 81 $hit_target[$nhits] = $1; 83 $hit_bitscore[$nhits] = $3; 84 $hit_Eval[$nhits] = $4; 85 $nhits++; 181 for ($i = 0; $i < $nhits; $i++) {
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H A D | demotic_blast.pm | 41 $nhits = 0; # Number of entries in the hit list 125 $hit_target[$nhits] = $1; 127 $hit_bitscore[$nhits] = $3; 129 if ($is_wublast) { $hit_Eval[$nhits] = $4; } # actually WU reports P-value 130 else { $hit_Eval[$nhits] = &repair_evalue($4); } 132 $nhits++; 278 for ($i = 0; $i < $nhits; $i++) {
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/dports/biology/infernal/infernal-1.1.3/easel/demotic/ |
H A D | demotic_hmmer.pm | 38 $nhits = 0; # Number of entries in the hit list 87 $hit_target[$nhits] = $6; 89 $hit_bitscore[$nhits] = $2; 90 $hit_Eval[$nhits] = $1; 91 $nhits++; 114 $ali_hitidx[$nali] = $nhits-1; 209 for ($i = 0; $i < $nhits; $i++) {
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H A D | demotic_h2.pm | 34 $nhits = 0; # Number of entries in the hit list 81 $hit_target[$nhits] = $1; 83 $hit_bitscore[$nhits] = $3; 84 $hit_Eval[$nhits] = $4; 85 $nhits++; 181 for ($i = 0; $i < $nhits; $i++) {
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | antigenic.c | 40 static void antigenic_dumptoFeat(ajint nhits, const AjPUint hp, 95 ajint nhits; in main() local 177 lenap = nhits = maxlen = maxpos = 0; in main() 192 ajUintPut(&hp,nhits,nhits); in main() 193 ajUintPut(&hpos,nhits,i-lenap); in main() 194 ajFloatPut(&hwt,nhits,score); in main() 195 ajUintPut(&hlen,nhits++,lenap); in main() 218 nhits,minap,averap); in main() 238 if(nhits) in main() 245 for(ii=nhits-1,j=0;ii>-1;--ii) in main() [all …]
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