Home
last modified time | relevance | path

Searched refs:norig_altloc (Results 1 – 1 of 1) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgmap.c958 int norig_primary, norig_altloc, i_primary, i_altloc, i, j; in stage3array_from_list() local
977 Stage3_count_paths(&norig_primary,&norig_altloc,stage3list); in stage3array_from_list()
983 *npaths_altloc = norig_altloc; in stage3array_from_list()
989 Stage3_count_paths(&norig_primary,&norig_altloc,stage3list); in stage3array_from_list()
993 if (norig_primary + norig_altloc <= 2) { in stage3array_from_list()
1000 *npaths_altloc = norig_altloc; in stage3array_from_list()
1036 while (i < norig_primary + norig_altloc) { in stage3array_from_list()
1062 for (i = 0; i < norig_primary + norig_altloc; i++) { in stage3array_from_list()
1066 for (j = i+1; j < norig_primary + norig_altloc; j++) { in stage3array_from_list()
1076 for (i = 0; i < norig_primary + norig_altloc; i++) { in stage3array_from_list()
[all …]