/dports/sysutils/fwup/fwup-1.9.0/src/ |
H A D | uboot_env.c | 209 struct uboot_name_value **pairarray = in uboot_env_sort() local 213 pairarray[i] = pair; in uboot_env_sort() 215 qsort(pairarray, count, sizeof(struct uboot_name_value *), env_name_compare); in uboot_env_sort() 218 pairarray[i]->next = pairarray[i + 1]; in uboot_env_sort() 219 pairarray[count - 1]->next = NULL; in uboot_env_sort() 220 env->vars = pairarray[0]; in uboot_env_sort() 222 free(pairarray); in uboot_env_sort()
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/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | stage3.c | 677 return this->pairarray; in Stage3_pairarray() 5240 struct Pair_T *pairarray; in make_pairarray() local 5291 return pairarray; in make_pairarray() 5367 this_left->pairarray = pairarray; in make_pairarray_merge() 5920 start = &(pairarray[0]); in Stage3_new() 5947 new->pairarray = pairarray; in Stage3_new() 6049 struct Pair_T *pairarray; in Stage3_new_from_pairs() local 6131 memcpy(new->pairarray,old->pairarray,old->npairs*sizeof(struct Pair_T)); 12960 pair = &(pairarray[i]); 13085 ptr = pairarray; in Stage3_bad_stretch_p() [all …]
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H A D | simplepair.h | 52 struct T *pairarray, int npairs, int querylength, 55 Simplepair_overlap_print_sam (Filestring_T fp, char *abbrev, struct T *pairarray, int npairs,
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H A D | pair.h | 56 Pair_set_genomepos (struct Pair_T *pairarray, int npairs, Univcoord_T chroffset, 218 Pair_print_sam (Filestring_T fp, char *abbrev, struct Pair_T *pairarray, int npairs, 343 struct T *pairarray, int npairs); 347 Pairarray_genomicbound_from_start (struct T *pairarray, int npairs, int overlap); 349 Pairarray_genomicbound_from_end (struct T *pairarray, int npairs, int overlap); 351 Pairarray_genomic_sequence (int *seqlength, struct T *pairarray, int npairs);
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H A D | pair.c | 258 pairarray[i].genomepos = chraliaslength - pairarray[i].genomepos; in Pair_set_genomepos() 2047 pair = &(pairarray[i]); 3949 ptr = pairarray; in Pair_print_bedpe() 4333 ptr = pairarray; 9636 lowi,pairarray[lowi].genomepos,middlei,pairarray[middlei].genomepos, 9688 lowi,pairarray[lowi].genomepos,middlei,pairarray[middlei].genomepos, 9776 start = &(pairarray[0]); in Pairarray_chrpos_bounds() 9793 pair = pairarray[i]; in Pairarray_genomicbound_from_start() 9795 pair = pairarray[i]; in Pairarray_genomicbound_from_start() 9811 pair = pairarray[i]; in Pairarray_genomicbound_from_end() [all …]
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H A D | stage3.h | 295 Stage3_new (struct Pair_T *pairarray, List_T pairs, int npairs, int goodness, 309 Stage3_short_alignment_p (struct Pair_T *pairarray, int npairs, int querylength); 312 Stage3_bad_stretch_p (struct Pair_T *pairarray, int npairs, int pos5, int pos3); 315 Stage3_good_part (struct Pair_T *pairarray, int npairs, int pos5, int pos3);
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H A D | samprint.c | 1437 struct Simplepair_T *pairarray; in SAM_print_paired() local 1548 pairarray = Stage3pair_merge(&npairs,&querylength_merged,&queryseq_merged,&quality_merged, in SAM_print_paired() 1563 chrpos_low = Simplepair_genomicpos_low(/*hardclip_low*/0,/*hardclip_high*/0,pairarray,npairs, in SAM_print_paired() 1577 Simplepair_overlap_print_sam(fp,/*abbrev*/ABBREV_UNPAIRED_UNIQ,pairarray,npairs, in SAM_print_paired() 1597 FREE_OUT(pairarray); in SAM_print_paired() 1758 pairarray = Stage3pair_merge(&npairs,&querylength_merged,&queryseq_merged,&quality_merged, in SAM_print_paired() 1773 chrpos_low = Simplepair_genomicpos_low(/*hardclip_low*/0,/*hardclip_high*/0,pairarray,npairs, in SAM_print_paired() 1785 Simplepair_overlap_print_sam(fp,ABBREV_CONCORDANT_MULT,pairarray,npairs, in SAM_print_paired() 1804 FREE_OUT(pairarray); in SAM_print_paired()
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H A D | simplepair.c | 295 struct T *pairarray, int npairs, int querylength, in Simplepair_genomicpos_low() argument 343 pairarray,npairs,querylength); in Simplepair_genomicpos_low() 358 pairarray,npairs,querylength); in Simplepair_genomicpos_low() 1729 Simplepair_overlap_print_sam (Filestring_T fp, char *abbrev, struct T *pairarray, int npairs, in Simplepair_overlap_print_sam() argument 1803 pairarray,npairs,querylength_given); in Simplepair_overlap_print_sam()
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H A D | gmap.c | 1272 struct Pair_T *pairarray; in update_stage3list() local 1339 pairarray = Stage3_compute_one(&cdna_direction,&sensedir,&pairs,&npairs,&goodness, in update_stage3list() 1367 if (pairarray == NULL) { in update_stage3list() 1370 FREE_OUT(pairarray); in update_stage3list() 1450 struct Pair_T *pairarray; in stage3_from_usersegment() local 1542 if (pairarray == NULL) { in stage3_from_usersegment() 1545 FREE_OUT(pairarray); in stage3_from_usersegment() 1781 struct Pair_T *pairarray; in stage3_from_gregions() local 1912 pairarray = Stage3_compute_ends(&cdna_direction,&sensedir,&pairs,&npairs,&goodness, in stage3_from_gregions() 1938 if (pairarray == NULL) { in stage3_from_gregions() [all …]
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/dports/print/texlive-base/texlive-20150521-source/utils/asymptote/ |
H A D | runmath.in | 10 pairarray* => pairArray() 19 typedef array pairarray; 228 pairarray *quadraticroots(explicit pair a, explicit pair b, explicit pair c)
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H A D | runarray.cc | 86 typedef array pairarray; typedef 1651 pairarray * b=vm::pop<pairarray *>(Stack); in gen_runarray59() 1652 pairarray * a=vm::pop<pairarray *>(Stack); in gen_runarray59() 1943 pairarray * a=vm::pop<pairarray *>(Stack); in gen_runarray64() 1969 {Stack->push<pairarray*>(c); return;} in gen_runarray64() 1976 pairarray * z=vm::pop<pairarray *>(Stack); in gen_runarray65()
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H A D | runtime.in | 42 pairarray* => pairArray() 119 typedef array pairarray; 915 pairarray *dirSpecifier(guide *g, Int t) 927 pairarray *controlSpecifier(guide *g, Int t)
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H A D | runpicture.in | 21 pairarray* => pairArray() 56 typedef array pairarray; 174 pen fillrule=CURRENTPEN, penarray *p, pairarray *z,
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H A D | runtime.cc | 139 typedef array pairarray; typedef 1362 if(!g->cyclic() && (t < 0 || t >= n-1)) {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime107() 1366 {Stack->push<pairarray*>(c); return;} in gen_runtime107() 1379 if(!g->cyclic() && (t < 0 || t >= n-1)) {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime108() 1387 {Stack->push<pairarray*>(c); return;} in gen_runtime108() 1388 } else {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime108()
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H A D | runmath.cc | 70 typedef array pairarray; typedef 413 {Stack->push<pairarray*>(roots); return;} in gen_runmath26()
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H A D | runarray.in | 15 pairarray* => pairArray() 44 typedef array pairarray; 1355 pair dot(pairarray *a, pairarray *b) 1612 pairarray* fft(pairarray *a, Int sign=1) 1641 Intarray2 *triangulate(pairarray *z)
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H A D | runpicture.cc | 90 typedef array pairarray; typedef 286 pairarray * z=vm::pop<pairarray *>(Stack); in gen_runpicture11()
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/dports/math/asymptote/asymptote-2.67/ |
H A D | runmath.in | 10 pairarray* => pairArray() 27 typedef array pairarray; 342 pairarray *quadraticroots(explicit pair a, explicit pair b, explicit pair c)
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H A D | runtime.in | 39 pairarray* => pairArray() 112 typedef array pairarray; 927 pairarray *dirSpecifier(guide *g, Int t) 939 pairarray *controlSpecifier(guide *g, Int t)
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H A D | runarray.cc | 92 typedef array pairarray; typedef 1777 pairarray * b=vm::pop<pairarray *>(Stack); in gen_runarray61() 1778 pairarray * a=vm::pop<pairarray *>(Stack); in gen_runarray61() 2179 pairarray * a=vm::pop<pairarray *>(Stack); in gen_runarray67() 2206 {Stack->push<pairarray*>(c); return;} in gen_runarray67() 2328 pairarray * z=vm::pop<pairarray *>(Stack); in gen_runarray70()
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H A D | runpicture.in | 21 pairarray* => pairArray() 55 typedef array pairarray; 196 pen fillrule=CURRENTPEN, penarray *p, pairarray *z,
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H A D | runtime.cc | 137 typedef array pairarray; typedef 1392 if(!g->cyclic() && (t < 0 || t >= n-1)) {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime110() 1396 {Stack->push<pairarray*>(c); return;} in gen_runtime110() 1409 if(!g->cyclic() && (t < 0 || t >= n-1)) {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime111() 1417 {Stack->push<pairarray*>(c); return;} in gen_runtime111() 1418 } else {Stack->push<pairarray*>(new array(0)); return;} in gen_runtime111()
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H A D | runmath.cc | 80 typedef array pairarray; typedef 529 {Stack->push<pairarray*>(roots); return;} in gen_runmath26()
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H A D | runarray.in | 15 pairarray* => pairArray() 49 typedef array pairarray; 1471 pair dot(pairarray *a, pairarray *b) 1830 pairarray* fft(pairarray *a, Int sign=1) 1965 Intarray2 *triangulate(pairarray *z)
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H A D | runpicture.cc | 92 typedef array pairarray; typedef 311 pairarray * z=vm::pop<pairarray *>(Stack); in gen_runpicture11()
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