Searched refs:pop_id_2 (Results 1 – 2 of 2) sorted by relevance
1932 int pop_id, pop_id_1, pop_id_2; in amova_ssd_ap_wg() local1943 pop_id_2 = grp_members[grps[g]][s]; in amova_ssd_ap_wg()1945 for (uint k = 0; k < pop_haplotypes[pop_id_2].size(); k++) { in amova_ssd_ap_wg()1946 if (pop_id_1 == pop_id_2) in amova_ssd_ap_wg()1947 …= hdists_1[loc_hap_index[pop_haplotypes[pop_id_1][j]]][loc_hap_index[pop_haplotypes[pop_id_2][k]]]; in amova_ssd_ap_wg()1949 …= hdists_2[loc_hap_index[pop_haplotypes[pop_id_1][j]]][loc_hap_index[pop_haplotypes[pop_id_2][k]]]; in amova_ssd_ap_wg()1993 int pop_id_1, pop_id_2; in amova_ssd_ag() local2008 pop_id_2 = grp_members[grps[g]][s]; in amova_ssd_ag()2010 for (uint k = 0; k < pop_haplotypes[pop_id_2].size(); k++) { in amova_ssd_ag()2011 … += hdists[loc_hap_index[pop_haplotypes[pop_id_1][j]]][loc_hap_index[pop_haplotypes[pop_id_2][k]]]; in amova_ssd_ag()
142 …tes, map<uint, uint> &sites_key, const vector<LocBin *> &sorted_loci, uint pop_id_1, uint pop_id_2) in init_sites() argument155 lsum_2 = sorted_loci[pos]->s->per_pop(pop_id_2); in init_sites()