Home
last modified time | relevance | path

Searched refs:pos3 (Results 1 – 25 of 2169) sorted by relevance

12345678910>>...87

/dports/biology/jalview/jalview/src/jalview/analysis/
H A DCodonComparator.java54 if (ac1.pos1 < ac2.pos1 && ac1.pos3 <= ac2.pos3) in compare()
58 if (ac2.pos1 < ac1.pos1 && ac2.pos3 <= ac1.pos3) in compare()
71 if (ac1.pos3 > ac2.pos3 && ac1.pos1 >= ac2.pos1) in compare()
75 if (ac2.pos3 > ac1.pos3 && ac2.pos1 >= ac1.pos1) in compare()
83 if (ac1.pos1 == ac2.pos1 && ac1.pos3 == ac2.pos3) in compare()
/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgenome128_hr.h17 int pos5, int pos3, bool plusp, int genestrand);
20 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand);
25 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand);
29 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand);
33 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand);
37 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand);
41 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand,
45 Univcoord_T left, int pos5, int pos3, bool plusp, int genestrand,
50 Univcoord_T left, int pos5, int pos3,
54 Univcoord_T left, int pos5, int pos3,
H A Dgenome_sites.h16 Univcoord_T left, int pos5, int pos3);
20 Univcoord_T left, int pos5, int pos3);
24 Univcoord_T left, int pos5, int pos3);
28 Univcoord_T left, int pos5, int pos3);
32 Genome_donor_positions_novel (int *site_positions, Univcoord_T left, int pos5, int pos3);
34 Genome_acceptor_positions_novel (int *site_positions, Univcoord_T left, int pos5, int pos3);
36 Genome_antidonor_positions_novel (int *site_positions, Univcoord_T left, int pos5, int pos3);
38 Genome_antiacceptor_positions_novel (int *site_positions, Univcoord_T left, int pos5, int pos3);
H A Dindel.c68 int pos5, int pos3, int querylength, in Indel_resolve_middle_insertion() argument
81 pos5,pos3)); in Indel_resolve_middle_insertion()
104 nmismatches_allowed,pos5,pos3)); in Indel_resolve_middle_insertion()
132 nmismatches_allowed,pos5,pos3)); in Indel_resolve_middle_insertion()
399 pos5,pos3)); in Indel_resolve_middle_deletion()
422 nmismatches_allowed,pos5,pos3)); in Indel_resolve_middle_deletion()
688 pos5,pos3)); in Indel_resolve_middle_deletion_or_splice()
745 nmismatches_allowed,pos5,pos3)); in Indel_resolve_middle_deletion_or_splice()
762 nmismatches_allowed,pos5,pos3)); in Indel_resolve_middle_deletion_or_splice()
1102 int pos5, pos3, pos5_0, adj; in Indel_solve_end_low() local
[all …]
/dports/emulators/libretro-vice/vice-libretro-5725415/deps/nibtools/
H A Dprot.c385 pos3 = pos+1; in align_rl_special()
390 pos3 = pos+1; in align_rl_special()
395 pos3 = work_buffer; in align_rl_special()
400 pos3 = pos; in align_rl_special()
446 pos3 = pos+3; in align_rl_special()
463 pos3 = pos+3; in align_rl_special()
489 pos3 = pos+181; in align_rl_special()
504 pos3 = pos+91; in align_rl_special()
521 pos3 = pos+196; in align_rl_special()
539 pos3 = pos+141; in align_rl_special()
[all …]
/dports/lang/racket/racket-8.3/src/regexp/parse/
H A Dmain.rkt62 (values (cons rx rxs) pos3)])]))
77 (values (rx:maybe rx non-greedy?) pos3)]
83 s pos3
171 (check-close-paren s pos3 config))]
177 s pos3
203 (check-close-paren s pos3 config))]
207 (check-close-paren s pos3 config))]
234 s pos3
236 (missing-closing-error s pos3 config)]
252 (add1 pos3))]))
[all …]
/dports/lang/racket-minimal/racket-8.3/src/regexp/parse/
H A Dmain.rkt62 (values (cons rx rxs) pos3)])]))
77 (values (rx:maybe rx non-greedy?) pos3)]
83 s pos3
171 (check-close-paren s pos3 config))]
177 s pos3
203 (check-close-paren s pos3 config))]
207 (check-close-paren s pos3 config))]
234 s pos3
236 (missing-closing-error s pos3 config)]
252 (add1 pos3))]))
[all …]
/dports/graphics/py-pyqtgraph/pyqtgraph-0.12.3/examples/
H A DGLScatterPlotItem.py73 pos3 = np.zeros((100,100,3)) variable
74 pos3[:,:,:2] = np.mgrid[:100, :100].transpose(1,2,0) * [-0.1,0.1]
75 pos3 = pos3.reshape(10000,3) variable
76 d3 = (pos3**2).sum(axis=1)**0.5
78 sp3 = gl.GLScatterPlotItem(pos=pos3, color=(1,1,1,.3), size=0.1, pxMode=False)
96 global sp3, d3, pos3
98 pos3[:,2] = z
104 sp3.setData(pos=pos3, color=color)
/dports/math/vtk8/VTK-8.2.0/IO/Infovis/
H A DvtkBiomTableReader.cxx173 size_t pos3 = this->FileContents.find(',', pos2+1); in ParseShape() local
174 if (pos3 == std::string::npos ) in ParseShape()
181 size_t pos4 = this->FileContents.find(']', pos3+1); in ParseShape()
194 atoi(this->FileContents.substr(pos3+1,pos4-pos3-1).c_str()); in ParseShape()
217 size_t pos3 = this->FileContents.find('\"', pos2+1); in ParseDataType() local
218 if (pos3 == std::string::npos ) in ParseDataType()
225 size_t pos4 = this->FileContents.find('\"', pos3+1); in ParseDataType()
233 std::string data_type = this->FileContents.substr(pos3+1,pos4-pos3-1); in ParseDataType()
315 size_t pos3 = this->FileContents.find('\"', pos2+1); in ParseSparseness() local
376 if (pos3 == std::string::npos) in ParseSparseData()
[all …]
/dports/math/vtk9/VTK-9.1.0/IO/Infovis/
H A DvtkBiomTableReader.cxx173 size_t pos3 = this->FileContents.find(',', pos2 + 1); in ParseShape() local
174 if (pos3 == std::string::npos) in ParseShape()
181 size_t pos4 = this->FileContents.find(']', pos3 + 1); in ParseShape()
192 this->NumberOfColumns = atoi(this->FileContents.substr(pos3 + 1, pos4 - pos3 - 1).c_str()); in ParseShape()
215 size_t pos3 = this->FileContents.find('\"', pos2 + 1); in ParseDataType() local
216 if (pos3 == std::string::npos) in ParseDataType()
223 size_t pos4 = this->FileContents.find('\"', pos3 + 1); in ParseDataType()
231 std::string data_type = this->FileContents.substr(pos3 + 1, pos4 - pos3 - 1); in ParseDataType()
313 size_t pos3 = this->FileContents.find('\"', pos2 + 1); in ParseSparseness() local
374 if (pos3 == std::string::npos) in ParseSparseData()
[all …]
/dports/biology/jalview/jalview/src/jalview/datamodel/
H A DAlignedCodon.java42 public final int pos3; field in AlignedCodon
59 pos3 = k; in AlignedCodon()
78 return base == 1 ? pos1 : (base == 2 ? pos2 : pos3); in getBaseColumn()
103 return (pos1 == ac.pos1 && pos2 == ac.pos2 && pos3 == ac.pos3); in equals()
111 .append(pos3).append("]"); in toString()
/dports/math/vtk6/VTK-6.2.0/IO/Infovis/
H A DvtkBiomTableReader.cxx206 size_t pos3 = this->FileContents.find(",", pos2+1); in ParseShape() local
207 if (pos3 == std::string::npos ) in ParseShape()
214 size_t pos4 = this->FileContents.find("]", pos3+1); in ParseShape()
227 atoi(this->FileContents.substr(pos3+1,pos4-pos3-1).c_str()); in ParseShape()
250 size_t pos3 = this->FileContents.find("\"", pos2+1); in ParseDataType() local
251 if (pos3 == std::string::npos ) in ParseDataType()
258 size_t pos4 = this->FileContents.find("\"", pos3+1); in ParseDataType()
266 std::string data_type = this->FileContents.substr(pos3+1,pos4-pos3-1); in ParseDataType()
348 size_t pos3 = this->FileContents.find("\"", pos2+1); in ParseSparseness() local
409 if (pos3 == std::string::npos) in ParseSparseData()
[all …]
/dports/graphics/libosmesa-gallium/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-libs/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-gallium-va/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-dri-gallium/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-gallium-vdpau/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-gallium-xa/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-devel/mesa-22.0-branchpoint-2059-ge8a63cf61ec/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/libosmesa/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/graphics/mesa-dri/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/lang/clover/mesa-21.3.6/src/gallium/auxiliary/draw/
H A Ddraw_pipe_wide_line.c64 float *pos3 = v3->data[pos]; in wideline_line() local
86 pos3[1] = pos3[1] + half_width - bias; in wideline_line()
93 pos3[0] -= 0.5f; in wideline_line()
100 pos3[0] += 0.5f; in wideline_line()
109 pos3[0] = pos3[0] + half_width + bias; in wideline_line()
116 pos3[1] -= 0.5f; in wideline_line()
123 pos3[1] += 0.5f; in wideline_line()
/dports/math/vtk8/VTK-8.2.0/Interaction/Widgets/Testing/Cxx/
H A DvtkConstrainedPointHandleRepresentationTest1.cxx130 double pos3[3]; in vtkConstrainedPointHandleRepresentationTest1() local
131 node1->GetPosition(pos3); in vtkConstrainedPointHandleRepresentationTest1()
132 if (pos3[0] != pos[0] || in vtkConstrainedPointHandleRepresentationTest1()
133 pos3[1] != pos[1]) in vtkConstrainedPointHandleRepresentationTest1()
135 …", " << pos[1] << ", " << pos[2] <<", instead got " << pos3[0] << ", " << pos3[1] << ", " << pos3[… in vtkConstrainedPointHandleRepresentationTest1()
140 std::cout << "Set Position to " << pos3[0] << ", " << pos3[1] << ", " << pos3[2] << std::endl; in vtkConstrainedPointHandleRepresentationTest1()
/dports/math/vtk9/VTK-9.1.0/Interaction/Widgets/Testing/Cxx/
H A DvtkConstrainedPointHandleRepresentationTest1.cxx119 double pos3[3]; in vtkConstrainedPointHandleRepresentationTest1() local
120 node1->GetPosition(pos3); in vtkConstrainedPointHandleRepresentationTest1()
121 if (pos3[0] != pos[0] || pos3[1] != pos[1]) in vtkConstrainedPointHandleRepresentationTest1()
124 << pos[2] << ", instead got " << pos3[0] << ", " << pos3[1] << ", " << pos3[2] in vtkConstrainedPointHandleRepresentationTest1()
130 std::cout << "Set Position to " << pos3[0] << ", " << pos3[1] << ", " << pos3[2] << std::endl; in vtkConstrainedPointHandleRepresentationTest1()
/dports/math/vtk6/VTK-6.2.0/Interaction/Widgets/Testing/Cxx/
H A DvtkConstrainedPointHandleRepresentationTest1.cxx130 double pos3[3]; in vtkConstrainedPointHandleRepresentationTest1() local
131 node1->GetPosition(pos3); in vtkConstrainedPointHandleRepresentationTest1()
132 if (pos3[0] != pos[0] || in vtkConstrainedPointHandleRepresentationTest1()
133 pos3[1] != pos[1]) in vtkConstrainedPointHandleRepresentationTest1()
135 …", " << pos[1] << ", " << pos[2] <<", instead got " << pos3[0] << ", " << pos3[1] << ", " << pos3[… in vtkConstrainedPointHandleRepresentationTest1()
140 std::cout << "Set Position to " << pos3[0] << ", " << pos3[1] << ", " << pos3[2] << std::endl; in vtkConstrainedPointHandleRepresentationTest1()

12345678910>>...87