| /dports/biology/mafft/mafft-7.267-without-extensions/core/ |
| H A D | MSalign11.c | 135 double *mjpt, *prept, *curpt; in backdp() local
215 wm = *prept; in backdp()
224 g = *prept; in backdp()
242 g = *prept; in backdp()
274 prept--; in backdp()
305 double *mjpt, *prept, *curpt; in MSalign11() local
493 prept = previousw; in MSalign11()
500 wm = *prept; in MSalign11()
515 g = *prept; in MSalign11()
534 g = *prept; in MSalign11()
[all …]
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| H A D | Lalign11.c | 517 prept = previousw; in L__align11()
532 wm = *prept; in L__align11()
546 if( *prept > mi ) in L__align11()
548 mi = *prept; in L__align11()
566 *mjpt = *prept; in L__align11()
674 prept++; in L__align11()
1021 prept = previousw; in L__align11_noalign()
1027 wm = *prept; in L__align11_noalign()
1043 mi = *prept; in L__align11_noalign()
1061 *mjpt = *prept; in L__align11_noalign()
[all …]
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| H A D | genalign11.c | 128 double *mjpt, *Mjpt, *prept, *curpt; in genL__align11() local
417 prept = previousw; in genL__align11()
427 wm = *prept; in genL__align11()
447 g = *prept; in genL__align11()
471 g = *prept; in genL__align11()
508 if( *prept > *Mjpt ) in genL__align11()
510 *Mjpt = *prept; in genL__align11()
516 if( *prept > Mi ) in genL__align11()
518 Mi = *prept; in genL__align11()
556 prept++; in genL__align11()
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| H A D | Galign11.c | 185 double *mjpt, *prept, *curpt; in G__align11() local
501 prept = previousw; in G__align11()
516 wm = *prept; in G__align11()
530 if( (g=*prept) >= mi ) in G__align11()
547 if( (g=*prept) >= *mjpt ) in G__align11()
637 prept++; in G__align11()
903 prept = previousw; in G__align11_noalign()
907 wm = *prept; in G__align11_noalign()
919 if( (g=*prept) >= mi ) in G__align11_noalign()
934 if( (g=*prept) >= *mjpt ) in G__align11_noalign()
[all …]
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| H A D | suboptalign11.c | 145 double *mjpt, *Mjpt, *prept, *curpt; in suboptalign11() local
420 prept = previousw; in suboptalign11()
430 wm = *prept; in suboptalign11()
450 g = *prept; in suboptalign11()
474 g = *prept; in suboptalign11()
510 g = *prept; in suboptalign11()
518 g = *prept; in suboptalign11()
594 prept++; in suboptalign11()
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| H A D | Lalignmm.c | 608 prept = previousw; in MSalign2m2m_rec()
617 wm = *prept; in MSalign2m2m_rec()
697 prept++; in MSalign2m2m_rec()
816 wm = *prept; in MSalign2m2m_rec()
899 prept--; in MSalign2m2m_rec()
904 g = *prept + fgcp1[i]; in MSalign2m2m_rec()
1508 prept = previousw; in MSalignmm_rec()
1517 wm = *prept; in MSalignmm_rec()
1597 prept++; in MSalignmm_rec()
1716 wm = *prept; in MSalignmm_rec()
[all …]
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| H A D | MSalignmm.c | 486 wm = *prept; in MSalignmm_tanni()
538 prept++; in MSalignmm_tanni()
951 wm = *prept; in MSalignmm_rec()
1023 prept++; in MSalignmm_rec()
1172 wm = *prept; in MSalignmm_rec()
1247 prept--; in MSalignmm_rec()
2106 wm = *prept; in MSalignmm_tanni_variousdist()
2158 prept++; in MSalignmm_tanni_variousdist()
2575 wm = *prept; in MSalignmm_rec_variousdist()
2647 prept++; in MSalignmm_rec_variousdist()
[all …]
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| H A D | partSalignmm.c | 971 double *mjpt, *prept, *curpt; in partA__align() local
1445 prept = previousw; in partA__align()
1477 wm = *prept; in partA__align()
1490 if( (g = *prept + *ogcp2pt * gf1vapre) >= mi ) in partA__align()
1506 if( (g = *prept + ogcp1va * *gf2ptpre) >= *mjpt ) in partA__align()
1563 prept++; in partA__align()
1659 double *mjpt, *prept, *curpt; in partA__align_variousdist() local
2179 prept = previousw; in partA__align_variousdist()
2214 wm = *prept; in partA__align_variousdist()
2227 if( (g = *prept + *ogcp2pt * gf1vapre) >= mi ) in partA__align_variousdist()
[all …]
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| H A D | Salignmm.c | 1033 double *mjpt, *prept, *curpt; in A__align() local
1563 prept = previousw; in A__align()
1596 wm = *prept; in A__align()
1610 if( (g=*prept+*ogcp2pt*gf1vapre) >= mi ) in A__align()
1629 if( (g=*prept+ ogcp1va* *gf2ptpre) >= *mjpt ) in A__align()
1690 prept++; in A__align()
1800 double *mjpt, *prept, *curpt; in A__align_variousdist() local
2413 prept = previousw; in A__align_variousdist()
2448 wm = *prept; in A__align_variousdist()
2462 if( (g=*prept+*ogcp2pt*gf1vapre) >= mi ) in A__align_variousdist()
[all …]
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| H A D | Dalignmm.c | 2727 double *mjpt, *prept, *curpt; in D__align() local
3647 prept = previousw; in D__align()
3794 wm = *prept; // Machigai!! in D__align()
3886 if( (g=*prept ) >= mi ) in D__align()
4042 if( (g=*prept ) >= *mjpt ) in D__align()
4289 prept++; in D__align()
4563 double *mjpt, *prept, *curpt; in D__align_variousdist() local
5577 prept = previousw; in D__align_variousdist()
5819 if( (g=*prept ) >= mi ) in D__align_variousdist()
5975 if( (g=*prept ) >= *mjpt ) in D__align_variousdist()
[all …]
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| /dports/audio/snack/snack2.2.10/generic/ |
| H A D | jkFormant.h | 49 short *prept; /* pointers to best previous cands. */ member
60 short *prept; /* backpointer array for each frame */ member
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| H A D | jkGetF0.h | 84 short *prept; /* pointers to best previous cands. */ member
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| H A D | jkGetF0.c | 1096 headF->dp->prept[k] = 0;
1099 headF->dp->prept[k] = minloc;
1143 pcands[k] = frm->dp->prept[k];
1162 pcands[k] = frm->dp->prept[pcands[k]];
1214 best_cand = frm->dp->prept[best_cand];
1290 frm->dp->prept = (short*)ckalloc(sizeof(short) * ncands);
1592 ckfree((void *)frm->dp->prept);
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| H A D | jkFormant.c | 236 fl[i]->prept = (short*)ckalloc(sizeof(short) * ncan);
280 fl[i]->prept[j] = mincan; /* point to best previous mapping */
316 printf(" cum:%7.2f pp:%d",fl[i]->cumerr[j], fl[i]->prept[j]);
371 mincan = fl[i]->prept[mincan];
394 ckfree((void *)fl[i]->prept);
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| /dports/graphics/seexpr/seexpr-3.4.4.0/src/tests/ |
| H A D | imageTests.cpp | 478 float prept = prepareTime.elapsedTime(); in TEST() local
496 std::cerr << "evalt " << evalt << " prept " << prept << " totalt " << totalt << std::endl; in TEST()
497 testing::Test::RecordProperty("prepareTime", std::to_string(prept).c_str()); in TEST()
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